RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CTAGE4Q8IX94 777 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 ASZ1Q8WWH4 475 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 CNTNAP3BQ96NU0 1288 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 CNTNAP3Q9BZ76 1288 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 P2RY12Q9H244 342 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 CCDC68Q9H2F9 335 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 IARS2Q9NSE4 1012 aaKnown RBP24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 INTS10Q9NVR2 710 aaKnown RBP24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 KPNA5O15131 536 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 MPOP05164 745 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 HOXB3P14651 431 aaPredicted RBP24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 CCKBRP32239 447 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 GABREP78334 506 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 HSPA14Q0VDF9 509 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 CTBP1Q13363 440 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 KLHL35Q6PF15 583 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 RAB11FIP2Q7L804 512 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 PLXDC1Q8IUK5 500 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 IGDCC3Q8IVU1 814 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 FBXO39Q8N4B4 442 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 PHC3Q8NDX5 983 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 OR4D9Q8NGE8 314 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 WDR36Q8NI36 951 aaKnown RBP24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 ZFPM2Q8WW38 1151 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 TFGQ92734 400 aaPredicted RBP24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 OR52A5Q9H2C5 316 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 POLR1BQ9H9Y6 1135 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 SATB2Q9UPW6 733 aa24.77■■□□□ 1.56
TSPAN4-207ENST00000397411 S1PR4O95977 384 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 ESR1P03372 595 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 ERVK-10P10266 1014 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 CHRM3P20309 590 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 RBMS1P29558 406 aaKnown RBP24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 CCR7P32248 378 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 LIMK2P53671 638 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 PLTPP55058 493 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 SLC7A5Q01650 507 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 CAV1Q03135 178 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 ZFP36L1Q07352 338 aaKnown RBP24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 WDR74Q6RFH5 385 aaPredicted RBP24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 OTOAQ7RTW8 1153 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 TMPRSS9Q7Z410 1059 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 PDZD3Q86UT5 571 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 DENND6AQ8IWF6 608 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 JPH3Q8WXH2 748 aaPredicted RBP24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 LPGAT1Q92604 370 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 CCDC74BQ96LY2 380 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 LRRC1Q9BTT6 524 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 FBXO6Q9NRD1 293 aaPredicted RBP24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 KLHL3Q9UH77 587 aa24.76■■□□□ 1.55
TSPAN4-207ENST00000397411 IGHV5-10-1A0A0J9YXX1 117 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 SLC5A10A0PJK1 596 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 TMEM8BA6NDV4 472 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 A8MU76 341 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 E5RI56 91 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 LSSP48449 732 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 PDX1P52945 283 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 TRA2AQ13595 282 aaKnown RBP eCLIP24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 RTP5Q14D33 572 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 KIF26BQ2KJY2 2108 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 ZNF658BQ4V348 819 aaPredicted RBP24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 XKR5Q6UX68 686 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 ZNF574Q6ZN55 896 aaPredicted RBP24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 SLITRK4Q8IW52 837 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 UNC5BQ8IZJ1 945 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 LSMEM2Q8N112 164 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 FBXO36Q8NEA4 188 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 MDM1Q8TC05 714 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 LKAAEAR1Q8TD35 194 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 LIN37Q96GY3 246 aaPredicted RBP24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 CMKLR1Q99788 373 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 MVB12BQ9H7P6 319 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 FBXO5Q9UKT4 447 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 ASF1AQ9Y294 204 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 TEX264Q9Y6I9 313 aa24.75■■□□□ 1.55
TSPAN4-207ENST00000397411 JMJD7P0C870 316 aa24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 PKMP14618 531 aaKnown RBP24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 AOAHP28039 575 aa24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 CSF2RBP32927 897 aa24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 SLC1A2P43004 574 aa24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 CARSP49589 748 aaKnown RBP24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 CFHR1Q03591 330 aa24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 EIF3IQ13347 325 aaKnown RBP24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 ARMC6Q6NXE6 501 aa24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 UNC5AQ6ZN44 842 aa24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 ZBED8Q8IZ13 594 aa24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 CEP112Q8N8E3 955 aa24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 CERS2Q96G23 380 aa24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 TMEM121BQ9BXQ6 578 aaPredicted RBP24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 SAYSD1Q9NPB0 183 aa24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 TMEM9Q9P0T7 183 aa24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 SLC24A2Q9UI40 661 aa24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 BPTFQ12830 3046 aa24.74■■□□□ 1.55
TSPAN4-207ENST00000397411 COL27A1Q8IZC6 1860 aaPredicted RBP24.73■■□□□ 1.55
TSPAN4-207ENST00000397411 CSTF2P33240 577 aaKnown RBP eCLIP24.73■■□□□ 1.55
TSPAN4-207ENST00000397411 ADARP55265 1226 aaKnown RBP24.73■■□□□ 1.55
TSPAN4-207ENST00000397411 ABRQ12979 859 aa24.73■■□□□ 1.55
TSPAN4-207ENST00000397411 ZNF789Q5FWF6 425 aa24.73■■□□□ 1.55
TSPAN4-207ENST00000397411 CTSL3PQ5NE16 218 aa24.73■■□□□ 1.55
TSPAN4-207ENST00000397411 PALM2Q8IXS6 379 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 183.7 ms