RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CSF2RBP32927 897 aa20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 CSE1LP55060 971 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 MPP1Q00013 466 aa20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 GUCY2DQ02846 1103 aa20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 TMPRSS9Q7Z410 1059 aa20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 B3GNT8Q7Z7M8 397 aa20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 PDZD3Q86UT5 571 aa20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 FOXP3Q9BZS1 431 aa20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 SAYSD1Q9NPB0 183 aa20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 EIF3HO15372 352 aaKnown RBP eCLIP20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 ADARP55265 1226 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 CBLBQ13191 982 aa20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 TMED2Q15363 201 aa20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 TRMT10BQ6PF06 316 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 PIM3Q86V86 326 aa20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 GABPB2Q8TAK5 448 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 SEC14L1Q92503 715 aa20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 TMEM159Q96B96 161 aa20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 PPANQ9NQ55 473 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 ENTPD2Q9Y5L3 495 aa20.7■□□□□ 0.9
TSPAN4-206ENST00000397408 H3BMM5 538 aa20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 NIPSNAP2O75323 286 aa20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 APOA4P06727 396 aa20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 PKMP14618 531 aaKnown RBP20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 CD151P48509 253 aa20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 PLOD1Q02809 727 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 HSPA14Q0VDF9 509 aa20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 CAMK2BQ13554 666 aa20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 KRT33BQ14525 404 aa20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 CLPPQ16740 277 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 CCDC25Q86WR0 208 aa20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 PYROXD1Q8WU10 500 aa20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 JPH3Q8WXH2 748 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 ATXN7L3BQ96GX2 97 aa20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 TMEM74Q96NL1 305 aa20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 EPB41L1Q9H4G0 881 aa20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 SLC17A6Q9P2U8 582 aa20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 DMGDHQ9UI17 866 aaKnown RBP20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 HEBP2Q9Y5Z4 205 aa20.69■□□□□ 0.9
TSPAN4-206ENST00000397408 TPRP12270 2363 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 AOAHP28039 575 aa20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 CARSP49589 748 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 INHBCP55103 352 aa20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 CFHR1Q03591 330 aa20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 PLCL1Q15111 1095 aa20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 GLE1Q53GS7 698 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 CAPN12Q6ZSI9 719 aa20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 SLITRK4Q8IW52 837 aa20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 CNTN4Q8IWV2 1026 aa20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 C2CD4AQ8NCU7 369 aaPredicted RBP20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 GSDMBQ8TAX9 411 aa20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 ASZ1Q8WWH4 475 aa20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 GATA6Q92908 595 aa20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 FAM136AQ96C01 138 aa20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 PHACTR1Q9C0D0 580 aa20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 COLEC10Q9Y6Z7 277 aa20.68■□□□□ 0.9
TSPAN4-206ENST00000397408 BHMG1C9JSJ3 638 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 UBXN7O94888 489 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 PROS1P07225 676 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 HOXB3P14651 431 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 TYRP1P17643 537 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 NDUFS1P28331 727 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 SQSTM1Q13501 440 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 FRG1Q14331 258 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 PHF19Q5T6S3 580 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 CNSTQ6PJW8 725 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 OTOAQ7RTW8 1153 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 VRK3Q8IV63 474 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 NCSTNQ92542 709 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 TFGQ92734 400 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 GRAMD1AQ96CP6 724 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 FERD3LQ96RJ6 166 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 TMEM121BQ9BXQ6 578 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 CCDC68Q9H2F9 335 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 SEMA6CQ9H3T2 930 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 KIR3DX1Q9H7L2 352 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 FAM114A2Q9NRY5 505 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 OGFRQ9NZT2 677 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 TMEM9Q9P0T7 183 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 CDYLQ9Y232 598 aa20.67■□□□□ 0.9
TSPAN4-206ENST00000397408 KIF26BQ2KJY2 2108 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 TRABD2BA6NFA1 517 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 E5RI56 91 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 GPC4O75487 556 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 HAUS5O94927 633 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 AMD1P17707 334 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 CHRM3P20309 590 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 CCKBRP32239 447 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 LEPRP48357 1165 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 ZFP36L1Q07352 338 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 ZNF549Q6P9A3 640 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 ZNF574Q6ZN55 896 aaPredicted RBP20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 KIAA0408Q6ZU52 694 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 SLC22A15Q8IZD6 547 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 PHC3Q8NDX5 983 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 OR4D9Q8NGE8 314 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 RSC1A1Q92681 617 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 DPYSL5Q9BPU6 564 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 HGH1Q9BTY7 390 aa20.66■□□□□ 0.9
TSPAN4-206ENST00000397408 STRADBQ9C0K7 418 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms