RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 KIF1CO43896 1103 aaKnown RBP10.14□□□□□ -0.79
NEDD8-202ENST00000396828 SLC25A14O95258 325 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-202ENST00000396828 DLGAP3O95886 979 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 MT-CYBP00156 380 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-202ENST00000396828 FURINP09958 794 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 SFTPCP11686 197 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 BRAFP15056 766 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 MAP4P27816 1152 aaKnown RBP10.14□□□□□ -0.79
NEDD8-202ENST00000396828 CA5AP35218 305 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 CCR10P46092 362 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 LEPRP48357 1165 aaKnown RBP10.14□□□□□ -0.79
NEDD8-202ENST00000396828 SEPHS1P49903 392 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 WNT3AP56704 352 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 PPP1CAP62136 330 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 SRSF1Q07955 248 aaKnown RBP eCLIP10.14□□□□□ -0.79
NEDD8-202ENST00000396828 CDH17Q12864 832 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 PDIA2Q13087 525 aaKnown RBP10.14□□□□□ -0.79
NEDD8-202ENST00000396828 SPARCL1Q14515 664 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 SEPT7Q16181 437 aaKnown RBP10.14□□□□□ -0.79
NEDD8-202ENST00000396828 DEFB109BQ30KR1 87 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 FNBP1LQ5T0N5 605 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 CEACAM20Q6UY09 585 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 TMC3Q7Z5M5 1100 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 SLC9B2Q86UD5 537 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 RELL1Q8IUW5 271 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 KLHDC8BQ8IXV7 354 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 RAVER1Q8IY67 606 aaKnown RBP10.14□□□□□ -0.79
NEDD8-202ENST00000396828 ZBED8Q8IZ13 594 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 TADA1Q96BN2 335 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 LRRC39Q96DD0 335 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 ELMO2Q96JJ3 720 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 GORASP1Q9BQQ3 440 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 FICDQ9BVA6 458 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 SPATA16Q9BXB7 569 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 ADGRE3Q9BY15 652 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 ADNPQ9H2P0 1102 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 OSGEPL1Q9H4B0 414 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 RMI1Q9H9A7 625 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 GPN2Q9H9Y4 310 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-202ENST00000396828 ZFYVE1Q9HBF4 777 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 SAYSD1Q9NPB0 183 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 BFARQ9NZS9 450 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 DNAJC16Q9Y2G8 782 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 TEX15Q9BXT5 2789 aa10.14□□□□□ -0.79
NEDD8-202ENST00000396828 MN1Q10571 1320 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-202ENST00000396828 KIR2DS5A0A0G2JLQ3 304 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 A0A0G2JNG1 304 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 RGSL1A5PLK6 1076 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 SDR42E2A6NKP2 422 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 OR52A4PA6NMU1 304 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 ZNF891A8MT65 544 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-202ENST00000396828 E7ESA3 106 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 KIR2DS3K7RE56 304 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 CHUKO15111 745 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 POLR1CO15160 346 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-202ENST00000396828 GPR39O43194 453 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 AGTP01019 485 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 EPOP01588 193 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 C9P02748 559 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 BPIP17213 487 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 XRCC1P18887 633 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-202ENST00000396828 NR1D1P20393 614 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 RPL10P27635 214 aaKnown RBP10.13□□□□□ -0.79
NEDD8-202ENST00000396828 STAT5AP42229 794 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 MAGEA4P43358 317 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 NPY2RP49146 381 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 PMS2P54278 862 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 EPHA4P54764 986 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 CDK18Q07002 472 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 CDC20Q12834 499 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 KIR2DS5Q14953 304 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 BBS9Q3SYG4 887 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 BEND6Q5SZJ8 279 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-202ENST00000396828 C16orf46Q6P387 395 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 KDELC1Q6UW63 502 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 TMEM26Q6ZUK4 368 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 TRMT10CQ7L0Y3 403 aaKnown RBP10.13□□□□□ -0.79
NEDD8-202ENST00000396828 C11orf96Q7Z7L8 435 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 CAND1Q86VP6 1230 aaKnown RBP10.13□□□□□ -0.79
NEDD8-202ENST00000396828 PHYKPLQ8IUZ5 450 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 PIP4P2Q8N4L2 257 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 OR52K1Q8NGK4 314 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 PYROXD1Q8WU10 500 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 UBLCP1Q8WVY7 318 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-202ENST00000396828 STARD8Q92502 1023 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 RSC1A1Q92681 617 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 GLYATL1Q969I3 302 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 SH3KBP1Q96B97 665 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 ABHD17AQ96GS6 310 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 MRGPRX2Q96LB1 330 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 C9orf72Q96LT7 481 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 PWWP2AQ96N64 755 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 TTC25Q96NG3 672 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 TGM7Q96PF1 710 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 TEFMQ96QE5 360 aaKnown RBP10.13□□□□□ -0.79
NEDD8-202ENST00000396828 TRIM39Q9HCM9 518 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 BPIFA1Q9NP55 256 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 CASS4Q9NQ75 786 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 SAMD15Q9P1V8 674 aa10.13□□□□□ -0.79
NEDD8-202ENST00000396828 WDR37Q9Y2I8 494 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms