RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 FARSBQ9NSD9 589 aaKnown RBP13.8□□□□□ -0.2
COL4A3-202ENST00000396578 MYO18AQ92614 2054 aaKnown RBP13.8□□□□□ -0.2
COL4A3-202ENST00000396578 TLX3O43711 291 aaPredicted RBP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 KAT7O95251 611 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 RPIAP49247 311 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 GBX2P52951 348 aaPredicted RBP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 VWA5B1Q5TIE3 1220 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 RIOX2Q8IUF8 465 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 CFAP52Q8N1V2 620 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 PNLDC1Q8NA58 520 aaKnown RBP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 OR2L8Q8NGY9 312 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 PIWIL1Q96J94 861 aaKnown RBP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 LENG8Q96PV6 779 aaPredicted RBP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 IPPKQ9H8X2 491 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 CUEDC1Q9NWM3 386 aaPredicted RBP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 PTCH2Q9Y6C5 1203 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 TACSTD2P09758 323 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 SRCP12931 536 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 PKMP14618 531 aaKnown RBP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 SPAM1P38567 509 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 MASP1P48740 699 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 PNLIPRP1P54315 467 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 CASP9P55211 416 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 PLEKHG4Q58EX7 1191 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 XKR4Q5GH76 650 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 PAMR1Q6UXH9 720 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 NUP54Q7Z3B4 507 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 CMTR2Q8IYT2 770 aaKnown RBP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 RIT1Q92963 219 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 DHRS1Q96LJ7 313 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 GRM6O15303 877 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 METTL21AQ8WXB1 218 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 CNDP2Q96KP4 475 aaKnown RBP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 RPL36Q9Y3U8 105 aaKnown RBP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 CD36P16671 472 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 NOMO2Q5JPE7 1267 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 LRRC55Q6ZSA7 311 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 POLR2J2Q9GZM3 115 aaKnown RBP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 RNF19AQ9NV58 838 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 WDR37Q9Y2I8 494 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 AP2A1O95782 977 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 IL7RP16871 459 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 ADCYAP1R1P41586 468 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 TUBA1BP68363 451 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 TARDBPQ13148 414 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 IFI44LQ53G44 452 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 RAB12Q6IQ22 244 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 ZNF517Q6ZMY9 492 aaPredicted RBP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 TUBA1AQ71U36 451 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 BTN2A3PQ96KV6 586 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 EBPLQ9BY08 206 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 ZNF282Q9UDV7 671 aaPredicted RBP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 SLC27A5Q9Y2P5 690 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 CYP3A7-CYP3A51PA0A087WV96 503 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 DAPL1A0PJW8 107 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 AXIN1O15169 862 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 CPNE3O75131 537 aaKnown RBP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 CYP3A7P24462 503 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 SNAP47Q5SQN1 464 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 CERS6Q6ZMG9 384 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 LRRC70Q7Z2Q7 622 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 UNC5BQ8IZJ1 945 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 KLHL36Q8N4N3 616 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 ZNF781Q8N8C0 355 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 GLB1L3Q8NCI6 653 aaPredicted RBP13.79□□□□□ -0.2
COL4A3-202ENST00000396578 TBATAQ96M53 351 aa13.79□□□□□ -0.2
COL4A3-202ENST00000396578 UGT1A9O60656 530 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 SHOX2O60902 331 aaPredicted RBP13.78□□□□□ -0.2
COL4A3-202ENST00000396578 FESP07332 822 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 UGT1A6P19224 532 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 UGT1A1P22309 533 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 UGT1A4P22310 534 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 UGT1A3P35503 534 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 KHKP50053 298 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 ANO7Q6IWH7 933 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 C2orf73Q8N5S3 287 aaPredicted RBP13.78□□□□□ -0.2
COL4A3-202ENST00000396578 OR6K6Q8NGW6 343 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 C1orf216Q8TAB5 229 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 UGT1A7Q9HAW7 530 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 UGT1A10Q9HAW8 530 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 UGT1A8Q9HAW9 530 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 RENP00797 406 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 STOMP27105 288 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 CMPK1P30085 196 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 TNFSF9P41273 254 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 YAP1P46937 504 aaKnown RBP13.78□□□□□ -0.2
COL4A3-202ENST00000396578 NOMO1Q15155 1222 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 KHDC1Q4VXA5 237 aaKnown RBP13.78□□□□□ -0.2
COL4A3-202ENST00000396578 KLHL26Q53HC5 615 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 PPM1JQ5JR12 505 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 ZNF285Q96NJ3 590 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 LYARQ9NX58 379 aaKnown RBP13.78□□□□□ -0.2
COL4A3-202ENST00000396578 KCNIP3Q9Y2W7 256 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 DEPDC5O75140 1603 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 MAP3K8P41279 467 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 APLP1P51693 650 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 NAE1Q13564 534 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 MON1AQ86VX9 555 aa13.78□□□□□ -0.2
COL4A3-202ENST00000396578 OR6K2Q8NGY2 324 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms