RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 BOP1Q14137 746 aaKnown RBP12.46□□□□□ -0.42
TRIM39-204ENST00000396548 C18orf21Q32NC0 220 aaPredicted RBP12.46□□□□□ -0.42
TRIM39-204ENST00000396548 UGT3A2Q3SY77 523 aa12.46□□□□□ -0.42
TRIM39-204ENST00000396548 YTHDF3Q7Z739 585 aaKnown RBP12.46□□□□□ -0.42
TRIM39-204ENST00000396548 FAM124AQ86V42 546 aa12.46□□□□□ -0.42
TRIM39-204ENST00000396548 HMGB4Q8WW32 186 aa12.46□□□□□ -0.42
TRIM39-204ENST00000396548 EBF4Q9BQW3 602 aa12.46□□□□□ -0.42
TRIM39-204ENST00000396548 PLCD4Q9BRC7 762 aa12.46□□□□□ -0.42
TRIM39-204ENST00000396548 MYLK2Q9H1R3 596 aa12.46□□□□□ -0.42
TRIM39-204ENST00000396548 STN1Q9H668 368 aaKnown RBP12.46□□□□□ -0.42
TRIM39-204ENST00000396548 SLC17A4Q9Y2C5 497 aa12.46□□□□□ -0.42
TRIM39-204ENST00000396548 A0A1B0GTL3 188 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 PDHA2P29803 388 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 IDH3AP50213 366 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 ARFIP2P53365 341 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 NAA20P61599 178 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 SGCGQ13326 291 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 TMEM31Q5JXX7 168 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 DENND6BQ8NEG7 585 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 SHDQ96IW2 340 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 WDR26Q9H7D7 661 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 COG4Q9H9E3 785 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 SLC23A2Q9UGH3 650 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 TSR3Q9UJK0 312 aaKnown RBP12.45□□□□□ -0.42
TRIM39-204ENST00000396548 ZNF225Q9UK10 706 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 DNMT3AQ9Y6K1 912 aaPredicted RBP12.45□□□□□ -0.42
TRIM39-204ENST00000396548 A0A0G2JND7 137 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 FAM170BA6NMN3 283 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 LIN7AO14910 233 aaPredicted RBP12.45□□□□□ -0.42
TRIM39-204ENST00000396548 CEACAM5P06731 702 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 FGF4P08620 206 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 GFAPP14136 432 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 PREPP48147 710 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 FAM83HQ6ZRV2 1179 aaPredicted RBP12.45□□□□□ -0.42
TRIM39-204ENST00000396548 TRPM8Q7Z2W7 1104 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 UBALD2Q8IYN6 164 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 SIX5Q8N196 739 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 FOXJ1Q92949 421 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 PARVBQ9HBI1 364 aa12.45□□□□□ -0.42
TRIM39-204ENST00000396548 MRPS17Q9Y2R5 130 aaKnown RBP12.45□□□□□ -0.42
TRIM39-204ENST00000396548 NCF1BA6NI72 391 aaPredicted RBP12.44□□□□□ -0.42
TRIM39-204ENST00000396548 NCF1CA8MVU1 366 aaPredicted RBP12.44□□□□□ -0.42
TRIM39-204ENST00000396548 IGHV4-34P06331 123 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 NCF1P14598 390 aaPredicted RBP12.44□□□□□ -0.42
TRIM39-204ENST00000396548 ARHGAP8P85298 464 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 IFT88Q13099 833 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 CFAP157Q5JU67 520 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 FAM219BQ5XKK7 198 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 METTL2BQ6P1Q9 378 aaKnown RBP12.44□□□□□ -0.42
TRIM39-204ENST00000396548 CUZD1Q86UP6 607 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 FLCNQ8NFG4 579 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 AGAP11Q8TF27 550 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 NELL2Q99435 816 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 APOOQ9BUR5 198 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 BTBD1Q9H0C5 482 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 FZD3Q9NPG1 666 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 CD274Q9NZQ7 290 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 EML5Q05BV3 1969 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 TMEM233B4DJY2 109 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 POP7O75817 140 aaKnown RBP12.44□□□□□ -0.42
TRIM39-204ENST00000396548 SUPT7LO94864 414 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 JUNP05412 331 aaKnown RBP12.44□□□□□ -0.42
TRIM39-204ENST00000396548 VCLP18206 1134 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 ACADLP28330 430 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 MAT2AP31153 395 aaKnown RBP12.44□□□□□ -0.42
TRIM39-204ENST00000396548 CLCQ05315 142 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 SPRED3Q2MJR0 410 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 FBXO48Q5FWF7 155 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.44□□□□□ -0.42
TRIM39-204ENST00000396548 UBE2R2Q712K3 238 aaPredicted RBP12.44□□□□□ -0.42
TRIM39-204ENST00000396548 RAB44Q7Z6P3 723 aaPredicted RBP12.44□□□□□ -0.42
TRIM39-204ENST00000396548 KLHDC8AQ8IYD2 350 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 MAELQ96JY0 434 aaKnown RBP12.44□□□□□ -0.42
TRIM39-204ENST00000396548 BMFQ96LC9 184 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 ASB2Q96Q27 587 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 C1QTNF7Q9BXJ2 289 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 SHCBP1LQ9BZQ2 653 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 EML4Q9HC35 981 aaKnown RBP12.44□□□□□ -0.42
TRIM39-204ENST00000396548 UTP6Q9NYH9 597 aaKnown RBP12.44□□□□□ -0.42
TRIM39-204ENST00000396548 PRR23AA6NEV1 266 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 MGAT4DA6NG13 374 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 DMPKQ09013 629 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 VWA5B1Q5TIE3 1220 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 SULT1C3Q6IMI6 304 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 MBOAT1Q6ZNC8 495 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 FBXO15Q8NCQ5 510 aaPredicted RBP12.44□□□□□ -0.42
TRIM39-204ENST00000396548 PJA1Q8NG27 643 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 ORAI3Q9BRQ5 295 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 OR52A5Q9H2C5 316 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 WSB2Q9NYS7 404 aaPredicted RBP12.44□□□□□ -0.42
TRIM39-204ENST00000396548 THEGQ9P2T0 379 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 VTI1BQ9UEU0 232 aa12.44□□□□□ -0.42
TRIM39-204ENST00000396548 HDAC3O15379 428 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 SLC6A12P48065 614 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 CCR5P51681 352 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 CDH13P55290 713 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 HNRNPH2P55795 449 aaKnown RBP12.43□□□□□ -0.42
TRIM39-204ENST00000396548 KIAA1024LP59773 190 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 PFN3P60673 137 aa12.43□□□□□ -0.42
TRIM39-204ENST00000396548 UBXN2BQ14CS0 331 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms