RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 DTNAQ9Y4J8 743 aa15.85■□□□□ 0.13
SNX6-202ENST00000396526 HOXC11O43248 304 aaPredicted RBP15.84■□□□□ 0.13
SNX6-202ENST00000396526 NUAK1O60285 661 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 ELFN1P0C7U0 828 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 MAP4P27816 1152 aaKnown RBP15.84■□□□□ 0.13
SNX6-202ENST00000396526 AOAHP28039 575 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 DPP6P42658 865 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 ATXN3P54252 364 aaPredicted RBP15.84■□□□□ 0.13
SNX6-202ENST00000396526 LDLRAP1Q5SW96 308 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 Q6ZVL8 140 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 FRS2Q8WU20 508 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 NAT14Q8WUY8 206 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 SORCS1Q8WY21 1168 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 ELMO1Q92556 727 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 BRINP2Q9C0B6 783 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 ELOVL2Q9NXB9 296 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 FBXO10Q9UK96 956 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 ADAMTS6Q9UKP5 1117 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 MYOFQ9NZM1 2061 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 MTCL1Q9Y4B5 1905 aaKnown RBP15.84■□□□□ 0.13
SNX6-202ENST00000396526 TIMP2P16035 220 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 PCSK2P16519 638 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 EN2P19622 333 aaPredicted RBP15.84■□□□□ 0.13
SNX6-202ENST00000396526 AP1S2P56377 157 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 CDKL1Q00532 357 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 FAM9CQ8IZT9 166 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 NR1H4Q96RI1 486 aaPredicted RBP15.84■□□□□ 0.13
SNX6-202ENST00000396526 SLC12A9Q9BXP2 914 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 TRPS1Q9UHF7 1281 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 ACOT8O14734 319 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 CASQ2O14958 399 aaPredicted RBP15.84■□□□□ 0.13
SNX6-202ENST00000396526 NPPAP01160 153 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 CYP17A1P05093 508 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 SLC2A4P14672 509 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 CCR7P32248 378 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 MED21Q13503 144 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 BLMHQ13867 455 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 ACOX1Q15067 660 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 SMU1Q2TAY7 513 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 SYTL3Q4VX76 610 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 CACHD1Q5VU97 1274 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 UCMAQ8WVF2 138 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 LRRC58Q96CX6 371 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 CCDC97Q96F63 343 aaPredicted RBP15.84■□□□□ 0.13
SNX6-202ENST00000396526 C1orf50Q9BV19 199 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 NTMT1Q9BV86 223 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 SLC29A3Q9BZD2 475 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 NFKBIL1Q9UBC1 381 aaPredicted RBP15.84■□□□□ 0.13
SNX6-202ENST00000396526 KLQ9UEF7 1012 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 SLC27A6Q9Y2P4 619 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 ASB1Q9Y576 335 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 AP4S1Q9Y587 144 aa15.84■□□□□ 0.13
SNX6-202ENST00000396526 DOCK6Q96HP0 2047 aa15.83■□□□□ 0.13
SNX6-202ENST00000396526 TSPAN11A1L157 253 aa15.83■□□□□ 0.13
SNX6-202ENST00000396526 MAGEA13PA6NCF6 341 aa15.83■□□□□ 0.13
SNX6-202ENST00000396526 C16orf96A6NNT2 1141 aa15.83■□□□□ 0.13
SNX6-202ENST00000396526 OR7A17O14581 309 aa15.83■□□□□ 0.13
SNX6-202ENST00000396526 CLDN9O95484 217 aa15.83■□□□□ 0.13
SNX6-202ENST00000396526 CA5AP35218 305 aa15.83■□□□□ 0.13
SNX6-202ENST00000396526 CASP2P42575 452 aa15.83■□□□□ 0.13
SNX6-202ENST00000396526 TMEM215Q68D42 235 aa15.83■□□□□ 0.13
SNX6-202ENST00000396526 LRRC70Q7Z2Q7 622 aa15.83■□□□□ 0.13
SNX6-202ENST00000396526 ADCY4Q8NFM4 1077 aa15.83■□□□□ 0.13
SNX6-202ENST00000396526 SCAMP4Q969E2 229 aa15.83■□□□□ 0.13
SNX6-202ENST00000396526 ZNF707Q96C28 371 aaPredicted RBP15.83■□□□□ 0.13
SNX6-202ENST00000396526 DYRK4Q9NR20 520 aa15.83■□□□□ 0.13
SNX6-202ENST00000396526 TRIM24O15164 1050 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 CAPN3P20807 821 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 MAPK9P45984 424 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 RHDQ02161 417 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 TRAF3Q13114 568 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 RCAN2Q14206 197 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 INPP5AQ14642 412 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 FNDC3BQ53EP0 1204 aaKnown RBP15.83■□□□□ 0.12
SNX6-202ENST00000396526 TMC5Q6UXY8 1006 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 RFLNAQ6ZTI6 216 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 NEK10Q6ZWH5 1172 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 DPPA4Q7L190 304 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 FAM156AQ8NDB6 213 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 ITFG1Q8TB96 612 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 OR8D1Q8WZ84 308 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 TMEM159Q96B96 161 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 MRGPRX3Q96LB0 322 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 RIOK2Q9BVS4 552 aaKnown RBP15.83■□□□□ 0.12
SNX6-202ENST00000396526 TAPBPO15533 448 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 TULP3O75386 442 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 GDF5P43026 501 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 GNPDA1P46926 289 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 RALGDSQ12967 914 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 CAMK1Q14012 370 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 C18orf21Q32NC0 220 aaPredicted RBP15.83■□□□□ 0.12
SNX6-202ENST00000396526 AASDHQ4L235 1098 aaPredicted RBP15.83■□□□□ 0.12
SNX6-202ENST00000396526 HABP4Q5JVS0 413 aaKnown RBP15.83■□□□□ 0.12
SNX6-202ENST00000396526 LPCAT4Q643R3 524 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 PRR23BQ6ZRT6 265 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 HSD11B1LQ7Z5J1 315 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 NRSN1Q8IZ57 195 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 AP2M1Q96CW1 435 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 FOPNLQ96NB1 174 aa15.83■□□□□ 0.12
SNX6-202ENST00000396526 MUC13Q9H3R2 512 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms