RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 BICRALQ6AI39 1079 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 ENOSF1Q7L5Y1 443 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 CHERPQ8IWX8 916 aaKnown RBP8.31□□□□□ -1.08
NDE1-202ENST00000396355 FBXL6Q8N531 539 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 YIPF7Q8N8F6 280 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 KBTBD8Q8NFY9 601 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 NR4A3Q92570 626 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 GDF15Q99988 308 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 WACQ9BTA9 647 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 FAM83DQ9H4H8 585 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 NANSQ9NR45 359 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 HCN3Q9P1Z3 774 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 DUX4Q9UBX2 424 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 GMPPBQ9Y5P6 360 aa8.31□□□□□ -1.08
NDE1-202ENST00000396355 TCRBV5S1A1TA0A578 114 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 LIASO43766 372 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 ZBTB14O43829 449 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 FAM189A1O60320 539 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 ABCB7O75027 752 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 IL6P05231 212 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 CDK1P06493 297 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 SNRPB2P08579 225 aaKnown RBP8.3□□□□□ -1.08
NDE1-202ENST00000396355 ICAM2P13598 275 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 SLC7A1P30825 629 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 TNFSF9P41273 254 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 CCR10P46092 362 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 KCNJ5P48544 419 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 TGM4P49221 684 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 BCAT1P54687 386 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 ENPEPQ07075 957 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 IFRD2Q12894 506 aaPredicted RBP8.3□□□□□ -1.08
NDE1-202ENST00000396355 SQLEQ14534 574 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 SHHQ15465 462 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 DDR2Q16832 855 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 MZT2BQ6NZ67 158 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 SPOCD1Q6ZMY3 1216 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 STRA8Q7Z7C7 330 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 SLC44A2Q8IWA5 706 aaPredicted RBP8.3□□□□□ -1.08
NDE1-202ENST00000396355 KATNAL2Q8IYT4 538 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 ABRAQ8N0Z2 381 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 LILRB2Q8N423 598 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.3□□□□□ -1.08
NDE1-202ENST00000396355 SIMC1Q8NDZ2 872 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 TEX47Q8TBZ9 253 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 CPB2Q96IY4 423 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 TXNDC15Q96J42 360 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 GSDMCQ9BYG8 508 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.3□□□□□ -1.08
NDE1-202ENST00000396355 CLEC4AQ9UMR7 237 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 B3GNT3Q9Y2A9 372 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 TRBV23-1A0A0A0MS06 115 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 WDR27A2RRH5 827 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 G3V2T6 193 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 LY86O95711 162 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 CST1P01037 141 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 C9P02748 559 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 PSAPP07602 524 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 MBL2P11226 248 aaPredicted RBP8.3□□□□□ -1.08
NDE1-202ENST00000396355 CYP2A7P20853 494 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 RHDQ02161 417 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 TEAD4Q15561 434 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 FAM98BQ52LJ0 330 aaKnown RBP8.3□□□□□ -1.08
NDE1-202ENST00000396355 HEATR6Q6AI08 1181 aaKnown RBP8.3□□□□□ -1.08
NDE1-202ENST00000396355 OR6B2Q6IFH4 312 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 C11orf88Q6PI97 169 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 CNSTQ6PJW8 725 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 ASB18Q6ZVZ8 466 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 ZNF767PQ75MW2 155 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 OTOP2Q7RTS6 562 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 ZBTB8OSQ8IWT0 167 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 GHDCQ8N2G8 530 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 MCPH1Q8NEM0 835 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 IPCEF1Q8WWN9 437 aaPredicted RBP8.3□□□□□ -1.08
NDE1-202ENST00000396355 CIDECQ96AQ7 238 aaPredicted RBP8.3□□□□□ -1.08
NDE1-202ENST00000396355 GHITMQ9H3K2 345 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 SMURF2Q9HAU4 748 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 C12orf10Q9HB07 376 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 RBAKQ9NYW8 714 aaPredicted RBP8.3□□□□□ -1.08
NDE1-202ENST00000396355 ERAP1Q9NZ08 941 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 EVLQ9UI08 416 aaPredicted RBP8.3□□□□□ -1.08
NDE1-202ENST00000396355 SLCO3A1Q9UIG8 710 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 ENPP5Q9UJA9 477 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 ERVK-19Q9WJR5 959 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 NDUFAF1Q9Y375 327 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 TEX51A0A1B0GUA7 166 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 TCRBV7S3A2A0A539 114 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 POM121BA6NF01 834 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 CAPN14A8MX76 684 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 CXorf49A8MYA2 514 aaPredicted RBP8.3□□□□□ -1.08
NDE1-202ENST00000396355 BTN3A1O00481 513 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 NR2C1P13056 603 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 GRIA4P48058 902 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 POLR2GP62487 172 aaKnown RBP eCLIP8.3□□□□□ -1.08
NDE1-202ENST00000396355 CSTF1Q05048 431 aaKnown RBP8.3□□□□□ -1.08
NDE1-202ENST00000396355 FGL1Q08830 312 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 LAPTM5Q13571 262 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 VPS26BQ4G0F5 336 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 TFDP3Q5H9I0 405 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 TIGD3Q6B0B8 471 aa8.3□□□□□ -1.08
NDE1-202ENST00000396355 TRMT10BQ6PF06 316 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms