RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ATP4BP51164 291 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 RGS1Q08116 209 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 MACC1Q6ZN28 852 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 ZCCHC23Q6ZST2 131 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 CYP2U1Q7Z449 544 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SETD7Q8WTS6 366 aaKnown RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SMPDL3AQ92484 453 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 PROX1Q92786 737 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 FAM162AQ96A26 154 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 RDH14Q9HBH5 336 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 CCNB1IP1Q9NPC3 277 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SLC17A7Q9P2U7 560 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 MRTO4Q9UKD2 239 aaKnown RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 GBF1Q92538 1859 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 MROH6A6NGR9 719 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 NBNO60934 754 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 POU2F2P09086 479 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 ATP1B2P14415 290 aaPredicted RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 TCF4P15884 667 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 ETV4P43268 484 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 VASPP50552 380 aaPredicted RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 GALNT3Q14435 633 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 KIAA0319Q5VV43 1072 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SCD5Q86SK9 330 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SYT12Q8IV01 421 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 ARFGAP1Q8N6T3 406 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 GLIS1Q8NBF1 620 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 ZCWPW2A0A1B0GU75 182 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 NCF1BA6NI72 391 aaPredicted RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 NCF1CA8MVU1 366 aaPredicted RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 NCF1P14598 390 aaPredicted RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SYN1P17600 705 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 GCKP35557 465 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 CSKP41240 450 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 DDX39BQ13838 428 aaKnown RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 CNSTQ6PJW8 725 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 ADGRG6Q86SQ4 1221 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 PQLC1Q8N2U9 271 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 GPR152Q8TDT2 470 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 GLYATL1Q969I3 302 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 C17orf80Q9BSJ5 609 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SH3BP4Q9P0V3 963 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 CADP27708 2225 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 A0A087WXM4 84 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 TRIM38O00635 465 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 KMOO15229 486 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 INPP4BO15327 924 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 GLULP15104 373 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 ITGB7P26010 798 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 EEF1DP29692 281 aaKnown RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 NTSP30990 170 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 VIPR1P32241 457 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 GPX6P59796 221 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 RBBP4Q09028 425 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 USP4Q13107 963 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 CPTPQ5TA50 214 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SDHAF4Q5VUM1 108 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 FRMD7Q6ZUT3 714 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF765Q7L2R6 523 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 CDK20Q8IZL9 346 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 DSELQ8IZU8 1212 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 STX19Q8N4C7 294 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 CDYL2Q8N8U2 506 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 FOXJ1Q92949 421 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 NXNL1Q96CM4 212 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 BRF2Q9HAW0 419 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SMOXQ9NWM0 555 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 CALML5Q9NZT1 146 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 ANAPC2Q9UJX6 822 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 C15orf41Q9Y2V0 281 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 TPRKBQ9Y3C4 175 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 H0YJX3 145 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 H3BNH8 94 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SNNO75324 88 aaPredicted RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 HPGDP15428 266 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 TFE3P19532 575 aaPredicted RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 ENDOUP21128 410 aaKnown RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 TRPC1P48995 793 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SPINT3P49223 89 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 CDKL1Q00532 357 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 OCA2Q04671 838 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 EMX2Q04743 252 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 PCBP2Q15366 365 aaKnown RBP eCLIP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 PITRM1Q5JRX3 1037 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 MED27Q6P2C8 311 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 CPNE9Q8IYJ1 553 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 TWIST2Q8WVJ9 160 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 MTERF3Q96E29 417 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 KLHL32Q96NJ5 620 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 OR52E6Q96RD3 313 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 RNF19AQ9NV58 838 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 FAM120CQ9NX05 1096 aaKnown RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 ACTR3BQ9P1U1 418 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 NFKBIL1Q9UBC1 381 aaPredicted RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 SUSD2Q9UGT4 822 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 FAM234BA2RU67 622 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 A8MT66 165 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 HNRNPH1P31943 449 aaKnown RBP3.33□□□□□ -1.88
VPS13C-203ENST00000395896 MTTPP55157 894 aa3.33□□□□□ -1.88
VPS13C-203ENST00000395896 USP46P62068 366 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms