RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 PREPP48147 710 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 GABRA4P48169 554 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 TNFSF10P50591 281 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 EPHB1P54762 984 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 CDH6P55285 790 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 GALNT3Q14435 633 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 QPCTQ16769 361 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 ZFYVE27Q5T4F4 411 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 KIRREL2Q6UWL6 708 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 ISLR2Q6UXK2 745 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 Q6ZPB1 254 aaPredicted RBP13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 CDHR3Q6ZTQ4 885 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 PROKR1Q8TCW9 393 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 NRGNQ92686 78 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 SPATA16Q9BXB7 569 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 NT5MQ9NPB1 228 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 SH3BGRL2Q9UJC5 107 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 SERTAD3Q9UJW9 196 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 HS3ST3B1Q9Y662 390 aa13.23□□□□□ -0.29
VCPKMT-201ENST00000395859 INTS1Q8N201 2190 aaKnown RBP13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 HCRTR1O43613 425 aa13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 SLC19A2O60779 497 aa13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 CALB1P05937 261 aa13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 LMAN1P49257 510 aa13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 ZNF135P52742 658 aaPredicted RBP13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 DCDP81605 110 aaKnown RBP13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 DSC2Q02487 901 aa13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 CLEC16AQ2KHT3 1053 aa13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 VPS35Q96QK1 796 aa13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 INSM2Q96T92 566 aaPredicted RBP13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 NDC1Q9BTX1 674 aa13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 POLR1EQ9GZS1 481 aaKnown RBP13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 KIR3DX1Q9H7L2 352 aa13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 SEC14L3Q9UDX4 400 aa13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 TINAGQ9UJW2 476 aa13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 PSMD13Q9UNM6 376 aa13.22□□□□□ -0.29
VCPKMT-201ENST00000395859 ANKRD66B4E2M5 251 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 ONECUT2O95948 504 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 VCLP18206 1134 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 POLR2CP19387 275 aaPredicted RBP13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 ITGAXP20702 1163 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 CDH3P22223 829 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 SOX11P35716 441 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 NSFP46459 744 aaKnown RBP13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 GCGRP47871 477 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 SRSF11Q05519 484 aaKnown RBP13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 NIPAL4Q0D2K0 466 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 CAMK4Q16566 473 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 MAN2A1Q16706 1144 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 PPP6R3Q5H9R7 873 aaPredicted RBP13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 C1orf189Q5VU69 101 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 CAVIN1Q6NZI2 390 aaKnown RBP13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 DNAJC24Q6P3W2 148 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 LINC00696Q6ZRV3 163 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 PSTKQ8IV42 348 aaKnown RBP13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 LPCAT1Q8NF37 534 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 DNAJB8Q8NHS0 232 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 CCHCR1Q8TD31 782 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 PSMF1Q92530 271 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 MAML1Q92585 1016 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 NINJ1Q92982 152 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 ARSGQ96EG1 525 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 MAGEB10Q96LZ2 347 aaPredicted RBP13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 AP1M1Q9BXS5 423 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 NDST4Q9H3R1 872 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 PCDH9Q9HC56 1237 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 IFT80Q9P2H3 777 aaPredicted RBP13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 GPN3Q9UHW5 284 aaPredicted RBP13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 RWDD2AQ9UIY3 292 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 MEMO1Q9Y316 297 aa13.21□□□□□ -0.29
VCPKMT-201ENST00000395859 HCFC1P51610 2035 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 ZANQ9Y493 2812 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 TRAV17A0A0B4J275 112 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 PRPSAP2O60256 369 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 CTSBP07858 339 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 CES1P23141 567 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 PRDX3P30048 256 aaKnown RBP13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 JAM2P57087 298 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 PPP2R2AP63151 447 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 TMEM115Q12893 351 aaPredicted RBP13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 NKAIN1Q4KMZ8 207 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 ALS2CLQ60I27 953 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 METRNLQ641Q3 311 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 FAAH2Q6GMR7 532 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 CXXC5Q7LFL8 322 aaKnown RBP13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 TMC3Q7Z5M5 1100 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 AMZ2Q86W34 360 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 TRAPPC5Q8IUR0 188 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 ATPAF2Q8N5M1 289 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 HAS2Q92819 552 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 SPSB2Q99619 263 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 SLC7A5P2Q9GIP4 190 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 IMP3Q9NV31 184 aaKnown RBP13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 NDOR1Q9UHB4 597 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 CFAP20Q9Y6A4 193 aaKnown RBP13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 AP1M2Q9Y6Q5 423 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 ANK2Q01484 3957 aa13.2□□□□□ -0.3
VCPKMT-201ENST00000395859 GTF3C1Q12789 2109 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 MATN2O00339 956 aa13.19□□□□□ -0.3
VCPKMT-201ENST00000395859 GFPT2O94808 682 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms