RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 SH3RF2Q8TEC5 729 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 ARNTL2Q8WYA1 636 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 PMEPA1Q969W9 287 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 SH3KBP1Q96B97 665 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 NODALQ96S42 347 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 NEURL2Q9BR09 285 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 TMEM245Q9H330 911 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 RETREG1Q9H6L5 497 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 ASB8Q9H765 288 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 BPIFA1Q9NP55 256 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 SNX15Q9NRS6 342 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 TBC1D30Q9Y2I9 924 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 USP3Q9Y6I4 520 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 MCM3APO60318 1980 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 COL11A1P12107 1806 aaPredicted RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 A0A1B0GW55 424 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 OR6C70A6NIJ9 312 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 J3KR12 359 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 PDPK1O15530 556 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 COCHO43405 550 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 PEX14O75381 377 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 CNTN5O94779 1100 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 HLA-DQB2P05538 268 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 LTA4HP09960 611 aaKnown RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 DUX4L2P0CJ85 424 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 DUX4L3P0CJ86 424 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 DUX4L4P0CJ87 422 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 DUX4L5P0CJ88 424 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 DUX4L6P0CJ89 424 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 DUX4L7P0CJ90 424 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 PCNAP12004 261 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 CTPS1P17812 591 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 SLC7A1P30825 629 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 POLD2P49005 469 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 SLC10A7Q0GE19 358 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 EPS8Q12929 822 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 TRIM71Q2Q1W2 868 aaKnown RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 ATAT1Q5SQI0 421 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 SNAP47Q5SQN1 464 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 STXBP5Q5T5C0 1151 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 NANOGP8Q6NSW7 305 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 MSANTD2Q6P1R3 559 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 PRMT9Q6P2P2 845 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 ANKRD33Q7Z3H0 272 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 SLC39A11Q8N1S5 342 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 RAB42Q8N4Z0 105 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 ABHD11Q8NFV4 315 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 TBC1D15Q8TC07 691 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 STYXQ8WUJ0 223 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 DCAKDQ8WVC6 231 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 CYP2S1Q96SQ9 504 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 CTRCQ99895 268 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 MIR1-1HGQ9H1L0 117 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 RERGLQ9H628 205 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 RAD18Q9NS91 495 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 WWOXQ9NZC7 414 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 DUX4Q9UBX2 424 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 ZNHIT2Q9UHR6 403 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 VWA7Q9Y334 891 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 NDUFAF1Q9Y375 327 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 TEX264Q9Y6I9 313 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 PRR23D1E9PI22 279 aaPredicted RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 H3BMM5 538 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 ZNF701M0R085 212 aaPredicted RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 INPPL1O15357 1258 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 RPP40O75818 363 aaKnown RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 GJB5O95377 273 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 OR56A5P0C7T3 313 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 PRR23D2P0DMB1 279 aaPredicted RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 GJA1P17302 382 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 MSH3P20585 1137 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 IVDP26440 423 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 NMBRP28336 390 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 WDR5P61964 334 aaKnown RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 AP1S1P61966 158 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 OLR1P78380 273 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 PRKCQQ04759 706 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 BNIP2Q12982 314 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 DLG2Q15700 870 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 INSCQ1MX18 579 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 MSS51Q4VC12 460 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 TSTD2Q5T7W7 516 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 LYPLAL1Q5VWZ2 237 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 TRIQKQ629K1 86 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 HMBOX1Q6NT76 420 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 ESRP1Q6NXG1 681 aaKnown RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 CHST9Q7L1S5 443 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 TAS1R1Q7RTX1 841 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 TMCO2Q7Z6W1 182 aaPredicted RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 AMIGO1Q86WK6 493 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 NKAPQ8N5F7 415 aaKnown RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 ZNF540Q8NDQ6 660 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 KBTBD8Q8NFY9 601 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 CANT1Q8WVQ1 401 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 ACDQ96AP0 544 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 PHF21BQ96EK2 531 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 CENPNQ96H22 339 aaPredicted RBP5.61□□□□□ -1.51
RFFL-202ENST00000394597 FBXL20Q96IG2 436 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 TTYH2Q9BSA4 534 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 EVLQ9UI08 416 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms