RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 G6PDP11413 515 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 VIPR1P32241 457 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 PTPN5P54829 565 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 PLIN5Q00G26 463 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 CRY1Q16526 586 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 GSTA3Q16772 222 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 ATP6AP1LQ52LC2 224 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 FAM78AQ5JUQ0 283 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 C6orf10Q5SRN2 563 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 IL23RQ5VWK5 629 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 BRAT1Q6PJG6 821 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 SPATA19Q7Z5L4 167 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 LILRA3Q8N6C8 439 aaPredicted RBP14.78□□□□□ -0.04
GPC3-202ENST00000394299 CELF5Q8N6W0 485 aaKnown RBP14.78□□□□□ -0.04
GPC3-202ENST00000394299 DNAJB14Q8TBM8 379 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 PROKR1Q8TCW9 393 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 ASB9Q96DX5 294 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 GPATCH1Q9BRR8 931 aaKnown RBP14.78□□□□□ -0.04
GPC3-202ENST00000394299 WRAP53Q9BUR4 548 aaKnown RBP14.78□□□□□ -0.04
GPC3-202ENST00000394299 ARL15Q9NXU5 204 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 PKD2L2Q9NZM6 624 aa14.78□□□□□ -0.04
GPC3-202ENST00000394299 CXorf51AA0A1B0GTR3 108 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 UPK3BL1B0FP48 263 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 UPK3BL2E5RIL1 263 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 ZNF197O14709 1029 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 VPS4BO75351 444 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 RNASEH2AO75792 299 aaKnown RBP14.77□□□□□ -0.04
GPC3-202ENST00000394299 OR56A5P0C7T3 313 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 HMOX2P30519 316 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 PBX2P40425 430 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 NRIP1P48552 1158 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 ERVK-8P63133 956 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 NR6A1Q15406 480 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 AP5B1Q2VPB7 878 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 GRAMD1BQ3KR37 738 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 SULT1C3Q6IMI6 304 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 UBE2R2Q712K3 238 aaPredicted RBP14.77□□□□□ -0.04
GPC3-202ENST00000394299 SLC15A3Q8IY34 581 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 VN1R2Q8NFZ6 395 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 CMTM6Q9NX76 183 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 ZDHHC7Q9NXF8 308 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 KLQ9UEF7 1012 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 EGFL7Q9UHF1 273 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 LRCH1Q9Y2L9 728 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 MYO9BQ13459 2157 aa14.77□□□□□ -0.04
GPC3-202ENST00000394299 ZNF106Q9H2Y7 1883 aaKnown RBP14.77□□□□□ -0.05
GPC3-202ENST00000394299 KPNA3O00505 521 aaPredicted RBP14.77□□□□□ -0.05
GPC3-202ENST00000394299 LSM1O15116 133 aaKnown RBP14.77□□□□□ -0.05
GPC3-202ENST00000394299 INPP4BO15327 924 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 SLC22A3O75751 556 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 OTCP00480 354 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 EPORP19235 508 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 PSMD8P48556 350 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 TTLL9Q3SXZ7 439 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 TIGD2Q4W5G0 525 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 PDSS2Q86YH6 399 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 PCYOX1LQ8NBM8 494 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 LEMD2Q8NC56 503 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 OSCP1Q8WVF1 389 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 LRRC58Q96CX6 371 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 P2RY13Q9BPV8 354 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 KLHL4Q9C0H6 718 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 ACTL8Q9H568 366 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 MRGBPQ9NV56 204 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 CEP290O15078 2479 aa14.77□□□□□ -0.05
GPC3-202ENST00000394299 XPAP23025 273 aaPredicted RBP14.76□□□□□ -0.05
GPC3-202ENST00000394299 GGT5P36269 586 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 CTSCP53634 463 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 ZNF805Q5CZA5 627 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 CMPK2Q5EBM0 449 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 RABL3Q5HYI8 236 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 PARS2Q7L3T8 475 aaKnown RBP14.76□□□□□ -0.05
GPC3-202ENST00000394299 OTUB2Q96DC9 234 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 SEMA6AQ9H2E6 1030 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 PIF1Q9H611 641 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 USP22Q9UPT9 525 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 CCL27Q9Y4X3 112 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 K7EPI3 171 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 STK16O75716 305 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 UBTFL6P0CB48 400 aaPredicted RBP14.76□□□□□ -0.05
GPC3-202ENST00000394299 CYP2A6P11509 494 aaPredicted RBP14.76□□□□□ -0.05
GPC3-202ENST00000394299 SLC2A4P14672 509 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 SLC6A2P23975 617 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 POLR2JP52435 117 aaKnown RBP14.76□□□□□ -0.05
GPC3-202ENST00000394299 DGKQP52824 942 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 KCNK10P57789 538 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 BLMHQ13867 455 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 CPSF6Q16630 551 aaKnown RBP eCLIP14.76□□□□□ -0.05
GPC3-202ENST00000394299 SLC2A7Q6PXP3 512 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 HACD2Q6Y1H2 254 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 RTL10Q7L3V2 364 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 IFNEQ86WN2 208 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 ELMO1Q92556 727 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 SLCO4A1Q96BD0 722 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 ROPN1LQ96C74 230 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 DCUN1D1Q96GG9 259 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 TMEM74Q96NL1 305 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 SLC2A11Q9BYW1 496 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 BRINP2Q9C0B6 783 aa14.76□□□□□ -0.05
GPC3-202ENST00000394299 ATG10Q9H0Y0 220 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms