RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 GJA1P17302 382 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 FOXM1Q08050 763 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 CHRNA6Q15825 494 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 IRAK1BP1Q5VVH5 260 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 CHST15Q7LFX5 561 aaPredicted RBP19.23■□□□□ 0.67
RCCD1-201ENST00000394258 RNF168Q8IYW5 571 aaPredicted RBP19.23■□□□□ 0.67
RCCD1-201ENST00000394258 VPS50Q96JG6 964 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 LATS2Q9NRM7 1088 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 CRLS1Q9UJA2 301 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 ANGPTL3Q9Y5C1 460 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 TMX2-CTNND1H3BSU7 103 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 RAD51BO15315 384 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 GREM1O60565 184 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 BPIP17213 487 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 CD9P21926 228 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 RFC2P35250 354 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 YAP1P46937 504 aaKnown RBP19.23■□□□□ 0.67
RCCD1-201ENST00000394258 HMGCS1Q01581 520 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 PTGR1Q14914 329 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 PLCL1Q15111 1095 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 SLC36A3Q495N2 470 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 ZFAND4Q86XD8 727 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 ADGRG2Q8IZP9 1017 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 TSPEARQ8WU66 669 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 CEP295NLQ96MC4 621 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 C9orf16Q9BUW7 83 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 ZFP14Q9HCL3 533 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 ZIM2Q9NZV7 527 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 EBF1Q9UH73 591 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 ANAPC2Q9UJX6 822 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 PCDHB1Q9Y5F3 818 aa19.23■□□□□ 0.67
RCCD1-201ENST00000394258 LSM1O15116 133 aaKnown RBP19.22■□□□□ 0.67
RCCD1-201ENST00000394258 SNAP29O95721 258 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 MYF6P23409 242 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 RPL38P63173 70 aaKnown RBP19.22■□□□□ 0.67
RCCD1-201ENST00000394258 GRIK2Q13002 908 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 CBX3Q13185 183 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 CERS6Q6ZMG9 384 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 ZSWIM9Q86XI8 627 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 MTFMTQ96DP5 389 aaKnown RBP19.22■□□□□ 0.67
RCCD1-201ENST00000394258 TRMT2BQ96GJ1 504 aaKnown RBP19.22■□□□□ 0.67
RCCD1-201ENST00000394258 RNF145Q96MT1 663 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 MAGED1Q9Y5V3 778 aaPredicted RBP19.22■□□□□ 0.67
RCCD1-201ENST00000394258 RASAL1O95294 804 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 TRBC1P01850 177 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 CKMP06732 381 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 ITGALP20701 1170 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 EPHB3P54753 998 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 TRAF3Q13114 568 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 PCBP2Q15366 365 aaKnown RBP eCLIP19.22■□□□□ 0.67
RCCD1-201ENST00000394258 SPRED1Q7Z699 444 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 RBFAQ8N0V3 343 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 DCAF4L2Q8NA75 395 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 DEFB118Q96PH6 123 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 C2orf49Q9BVC5 232 aaPredicted RBP19.22■□□□□ 0.67
RCCD1-201ENST00000394258 WWOXQ9NZC7 414 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 ZNHIT2Q9UHR6 403 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 STOML2Q9UJZ1 356 aa19.22■□□□□ 0.67
RCCD1-201ENST00000394258 TNPO3Q9Y5L0 923 aaKnown RBP19.22■□□□□ 0.67
RCCD1-201ENST00000394258 PLXNA4Q9HCM2 1894 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 CLOCKO15516 846 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 PCNAP12004 261 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 STK19P49842 368 aaPredicted RBP19.21■□□□□ 0.67
RCCD1-201ENST00000394258 AP1S1P61966 158 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 LRRC73Q5JTD7 316 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 OTUD3Q5T2D3 398 aaPredicted RBP19.21■□□□□ 0.67
RCCD1-201ENST00000394258 TPGS2Q68CL5 300 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 RETSATQ6NUM9 610 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 ZNF783Q6ZMS7 281 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 SNX20Q7Z614 316 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 ZNF554Q86TJ5 538 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 PTRH1Q86Y79 214 aaKnown RBP19.21■□□□□ 0.67
RCCD1-201ENST00000394258 BBS7Q8IWZ6 715 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 HHIPL1Q96JK4 782 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 FAM126AQ9BYI3 521 aaPredicted RBP19.21■□□□□ 0.67
RCCD1-201ENST00000394258 SMG9Q9H0W8 520 aaKnown RBP19.21■□□□□ 0.67
RCCD1-201ENST00000394258 KLQ9UEF7 1012 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 CIDEBQ9UHD4 219 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 FAF1Q9UNN5 650 aaPredicted RBP19.21■□□□□ 0.67
RCCD1-201ENST00000394258 MYOFQ9NZM1 2061 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 GLYATL1P3A0A0U1RQE8 302 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 OTCP00480 354 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 GPIP06744 558 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 VARSP26640 1264 aaKnown RBP19.21■□□□□ 0.67
RCCD1-201ENST00000394258 RGS4P49798 205 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 CDK9P50750 372 aaKnown RBP19.21■□□□□ 0.67
RCCD1-201ENST00000394258 NAA20P61599 178 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 ZIK1Q3SY52 487 aaPredicted RBP19.21■□□□□ 0.67
RCCD1-201ENST00000394258 GLYATQ6IB77 296 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 TMEM214Q6NUQ4 689 aaKnown RBP19.21■□□□□ 0.67
RCCD1-201ENST00000394258 DLEU7Q6UYE1 221 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 DNAJC14Q6Y2X3 702 aaPredicted RBP19.21■□□□□ 0.67
RCCD1-201ENST00000394258 CLVS1Q8IUQ0 354 aaPredicted RBP19.21■□□□□ 0.67
RCCD1-201ENST00000394258 HID1Q8IV36 788 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 PACRGLQ8N7B6 248 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 HM13Q8TCT9 377 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 PDLIM5Q96HC4 596 aaKnown RBP19.21■□□□□ 0.67
RCCD1-201ENST00000394258 CHID1Q9BWS9 393 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 GNPTGQ9UJJ9 305 aa19.21■□□□□ 0.67
RCCD1-201ENST00000394258 FADS3Q9Y5Q0 445 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms