RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 RMDN2Q96LZ7 410 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 RUFY1Q96T51 708 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 SLC25A23Q9BV35 468 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 NLNQ9BYT8 704 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 ING2Q9H160 280 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 ARNT2Q9HBZ2 717 aa17.02■□□□□ 0.32
SNRPA1-202ENST00000394082 IGLV3-16A0A075B6K0 115 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 CFAP99D6REC4 459 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 MEN1O00255 615 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 VPS4BO75351 444 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 DNAJB5O75953 348 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 GSTM1P09488 218 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 PTPN7P35236 360 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 RORAP35398 523 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 GSTM4Q03013 218 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 IL10RAQ13651 578 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 PRPSAP1Q14558 356 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 PTPRCAPQ14761 206 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 LLGL1Q15334 1064 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 GPR19Q15760 415 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 GPR33Q49SQ1 333 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 PLEKHS1Q5SXH7 462 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 DET1Q7L5Y6 550 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 SNX20Q7Z614 316 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 KLHDC8BQ8IXV7 354 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 CFAP206Q8IYR0 622 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 NXPE1Q8N323 547 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 HAUS1Q96CS2 278 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 DPH2Q9BQC3 489 aaPredicted RBP17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 FICDQ9BVA6 458 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 PITPNM3Q9BZ71 974 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 CHST8Q9H2A9 424 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 TFB2MQ9H5Q4 396 aaKnown RBP17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 ACSS2Q9NR19 701 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 FKBPLQ9UIM3 349 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 VPS4AQ9UN37 437 aa17.01■□□□□ 0.31
SNRPA1-202ENST00000394082 PRRC2CQ9Y520 2896 aaKnown RBP17■□□□□ 0.31
SNRPA1-202ENST00000394082 TTLL8A6PVC2 850 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 F5H423 210 aaPredicted RBP17■□□□□ 0.31
SNRPA1-202ENST00000394082 H7C0C1 242 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 MAP3K7O43318 606 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 ATP1B2P14415 290 aaPredicted RBP17■□□□□ 0.31
SNRPA1-202ENST00000394082 ITGALP20701 1170 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 ATP5OP48047 213 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 ZNF140P52738 457 aaPredicted RBP17■□□□□ 0.31
SNRPA1-202ENST00000394082 RPS18P62269 152 aaKnown RBP17■□□□□ 0.31
SNRPA1-202ENST00000394082 RPA4Q13156 261 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 KRT33BQ14525 404 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 GSE1Q14687 1217 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 SKOR2Q2VWA4 1001 aaPredicted RBP17■□□□□ 0.31
SNRPA1-202ENST00000394082 ZNF658BQ4V348 819 aaPredicted RBP17■□□□□ 0.31
SNRPA1-202ENST00000394082 ANKRD20A2Q5SQ80 823 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 ANKRD20A1Q5TYW2 823 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 ANKRD20A3Q5VUR7 823 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 DUS1LQ6P1R4 473 aaKnown RBP17■□□□□ 0.31
SNRPA1-202ENST00000394082 CCDC170Q8IYT3 715 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 EFCAB3Q8N7B9 438 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 OR4E2Q8NGC2 313 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 COPS8Q99627 209 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 GOLPH3Q9H4A6 298 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 VPS37BQ9H9H4 285 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 LUC7LQ9NQ29 371 aaKnown RBP17■□□□□ 0.31
SNRPA1-202ENST00000394082 SOHLH2Q9NX45 425 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 CRLS1Q9UJA2 301 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 TCFL5Q9UL49 500 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 ZNF451Q9Y4E5 1061 aa17■□□□□ 0.31
SNRPA1-202ENST00000394082 SLC9B1P1A6NJY1 282 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 H7C0S8 307 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 STK10O94804 968 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 SORBS2O94875 1100 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 POLR2CP19387 275 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 CDH3P22223 829 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 VARSP26640 1264 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 PRDX3P30048 256 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 CTNNA1P35221 906 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 MARCKSL1P49006 195 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 ZNF789Q5FWF6 425 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 MED25Q71SY5 747 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 DAAM2Q86T65 1068 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 CDKL3Q8IVW4 592 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 TMEM102Q8N9M5 508 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 ACTL9Q8TC94 416 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 CPT1CQ8TCG5 803 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 LCN9Q8WX39 176 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 KRT35Q92764 455 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 LRRC45Q96CN5 670 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 OR52A5Q9H2C5 316 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 SRMSQ9H3Y6 488 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 MVB12BQ9H7P6 319 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 SERTAD3Q9UJW9 196 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 G3BP2Q9UN86 482 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 SNX7Q9UNH6 387 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 MAP4K5Q9Y4K4 846 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 PCDHA3Q9Y5H8 950 aa16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 UTP20O75691 2785 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-202ENST00000394082 TRBV5-4A0A0C4DH59 114 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 IFRD1O00458 451 aaPredicted RBP16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 PJA2O43164 708 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 POLBP06746 335 aa16.98■□□□□ 0.31
SNRPA1-202ENST00000394082 CAPN1P07384 714 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms