RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CEP295Q9C0D2 2601 aa18.56■□□□□ 0.56
PDLIM7-204ENST00000393546 E7ESA3 106 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 EIF3HO15372 352 aaKnown RBP eCLIP18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 UBXN7O94888 489 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 APOA4P06727 396 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 PROS1P07225 676 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 ERVK-10P10266 1014 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 AOAHP28039 575 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 CCKBRP32239 447 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 PLTPP55058 493 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 ZFP36L1Q07352 338 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 TMED2Q15363 201 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 TMEM71Q6P5X7 295 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 WDR74Q6RFH5 385 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 NAPRTQ6XQN6 538 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 UNC5AQ6ZN44 842 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 B3GNT8Q7Z7M8 397 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 DENND6AQ8IWF6 608 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 UNC5BQ8IZJ1 945 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 KRT222Q8N1A0 295 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 FBXO36Q8NEA4 188 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 OR4D9Q8NGE8 314 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 TFGQ92734 400 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 BIRC8Q96P09 236 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 FERD3LQ96RJ6 166 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 PPANQ9NQ55 473 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 FBXO6Q9NRD1 293 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 FBXO5Q9UKT4 447 aa18.55■□□□□ 0.56
PDLIM7-204ENST00000393546 CCDC187A0A096LP49 1063 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 PKMP14618 531 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 HOXB3P14651 431 aaPredicted RBP18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 TYRP1P17643 537 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 SLC1A2P43004 574 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 PDX1P52945 283 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 LIMK2P53671 638 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 CSE1LP55060 971 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 CFHR1Q03591 330 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 HSPA14Q0VDF9 509 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 RTP5Q14D33 572 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 CTSL3PQ5NE16 218 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 PHF19Q5T6S3 580 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 STEAP4Q687X5 459 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 DUS1LQ6P1R4 473 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 UNQ6494/PRO21346Q6UXR6 183 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 ZNF574Q6ZN55 896 aaPredicted RBP18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 TMPRSS9Q7Z410 1059 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 PDZD3Q86UT5 571 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 SLITRK4Q8IW52 837 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 ZBED8Q8IZ13 594 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 LKAAEAR1Q8TD35 194 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 PYROXD1Q8WU10 500 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 NXPE2Q96DL1 559 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 CERS2Q96G23 380 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 LIN37Q96GY3 246 aaPredicted RBP18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 CCDC68Q9H2F9 335 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 SEMA6CQ9H3T2 930 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 MVB12BQ9H7P6 319 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 AK5Q9Y6K8 562 aa18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 COL27A1Q8IZC6 1860 aaPredicted RBP18.54■□□□□ 0.56
PDLIM7-204ENST00000393546 IGHV5-10-1A0A0J9YXX1 117 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 C1QTNF9BB2RNN3 333 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 GPC4O75487 556 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 C1QTNF9P0C862 333 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 CHRM3P20309 590 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 CARSP49589 748 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 GUCY2DQ02846 1103 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 TRA2AQ13595 282 aaKnown RBP eCLIP18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 PLCL1Q15111 1095 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 TRADDQ15628 312 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 GLE1Q53GS7 698 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 ZNF789Q5FWF6 425 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 KLHL35Q6PF15 583 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 OTOAQ7RTW8 1153 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 PLXDC1Q8IUK5 500 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 PHC3Q8NDX5 983 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 WDR36Q8NI36 951 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 GSDMBQ8TAX9 411 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 WDR83Q9BRX9 315 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 TMEM121BQ9BXQ6 578 aaPredicted RBP18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 KIR3DX1Q9H7L2 352 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 SAYSD1Q9NPB0 183 aa18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 AKAP7Q9P0M2 348 aaPredicted RBP18.53■□□□□ 0.56
PDLIM7-204ENST00000393546 BHMG1C9JSJ3 638 aaPredicted RBP18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 E5RI56 91 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 HAUS5O94927 633 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 MPSTP25325 297 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 ACADLP28330 430 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 CSF2RBP32927 897 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 LEPRP48357 1165 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 LSSP48449 732 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 EIF3IQ13347 325 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 FRG1Q14331 258 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 FASTKD3Q14CZ7 662 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 PLEKHS1Q5SXH7 462 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 RAB11FIP2Q7L804 512 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 PALM2Q8IXS6 379 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 SLC22A15Q8IZD6 547 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 NOA1Q8NC60 698 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 C2CD4AQ8NCU7 369 aaPredicted RBP18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 ACVR1CQ8NER5 493 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms