RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TTC23LQ6PF05 361 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 NEK10Q6ZWH5 1172 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 GET4Q7L5D6 327 aaPredicted RBP10.38□□□□□ -0.75
CALD1-203ENST00000393118 OTOP2Q7RTS6 562 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 ADGRG6Q86SQ4 1221 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 PLD3Q8IV08 490 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 SYTL1Q8IYJ3 562 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 OR2T12Q8NG77 320 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 DERL2Q9GZP9 239 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 SMG9Q9H0W8 520 aaKnown RBP10.38□□□□□ -0.75
CALD1-203ENST00000393118 CRISPLD1Q9H336 500 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 RMND5AQ9H871 391 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 CXorf21Q9HAI6 301 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 A0A1W2PRU2 124 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 A8MU76 341 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 EI24O14681 340 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 ARPC2O15144 300 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 EFNA1P20827 205 aaPredicted RBP10.37□□□□□ -0.75
CALD1-203ENST00000393118 CTGFP29279 349 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 GSK3BP49841 420 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 IST1P53990 364 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 SEMA3AQ14563 771 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 C18orf21Q32NC0 220 aaPredicted RBP10.37□□□□□ -0.75
CALD1-203ENST00000393118 UBE2R2Q712K3 238 aaPredicted RBP10.37□□□□□ -0.75
CALD1-203ENST00000393118 LIMS2Q7Z4I7 341 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 SLC44A2Q8IWA5 706 aaPredicted RBP10.37□□□□□ -0.75
CALD1-203ENST00000393118 OR10A6Q8NH74 314 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 ZNF461Q8TAF7 563 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 TMEM159Q96B96 161 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 APOLD1Q96LR9 279 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 RANBP9Q96S59 729 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 TDRD1Q9BXT4 1180 aaKnown RBP10.37□□□□□ -0.75
CALD1-203ENST00000393118 EMILIN2Q9BXX0 1053 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 HMG20AQ9NP66 347 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 DYRK4Q9NR20 520 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 TRAV19A0A0A6YYK7 116 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 PRR23AA6NEV1 266 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 STK16O75716 305 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 ATXN1LP0C7T5 689 aaKnown RBP10.37□□□□□ -0.75
CALD1-203ENST00000393118 CCNA2P20248 432 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 SLC26A3P40879 764 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 RPIAP49247 311 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 NKX2-5P52952 324 aaPredicted RBP10.37□□□□□ -0.75
CALD1-203ENST00000393118 MAD2L1Q13257 205 aaPredicted RBP10.37□□□□□ -0.75
CALD1-203ENST00000393118 ZNF697Q5TEC3 545 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 NADSYN1Q6IA69 706 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 CERS6Q6ZMG9 384 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 BNIPLQ7Z465 357 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 SYVN1Q86TM6 617 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 ZBTB2Q8N680 514 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 TNIP2Q8NFZ5 429 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 ISL2Q96A47 359 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 CHID1Q9BWS9 393 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 CLK4Q9HAZ1 481 aaKnown RBP10.37□□□□□ -0.75
CALD1-203ENST00000393118 ARNT2Q9HBZ2 717 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 TMEM98Q9Y2Y6 226 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 PCDHB1Q9Y5F3 818 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 PCDHGA7Q9Y5G6 932 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 OR2AG2A6NM03 316 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 ERVK-8P63133 956 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 IL5RAQ01344 420 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 TLE2Q04725 743 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 TNK2Q07912 1038 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 CHRNA6Q15825 494 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 ADCK2Q7Z695 626 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 SYT12Q8IV01 421 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 OR4F6Q8NGB9 312 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 TMIGD2Q96BF3 282 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 ZNF419Q96HQ0 510 aaPredicted RBP10.37□□□□□ -0.75
CALD1-203ENST00000393118 PRICKLE1Q96MT3 831 aaPredicted RBP10.37□□□□□ -0.75
CALD1-203ENST00000393118 ABCB8Q9NUT2 735 aa10.37□□□□□ -0.75
CALD1-203ENST00000393118 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.36□□□□□ -0.75
CALD1-203ENST00000393118 MGAT4DA6NG13 374 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 C16orf96A6NNT2 1141 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 TOR1BO14657 336 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 CCL16O15467 120 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 SBK3P0C264 359 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 G6PDP11413 515 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 CYP2A7P20853 494 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 PCSK6P29122 969 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 SOAT1P35610 550 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 GNPDA1P46926 289 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 KRT33BQ14525 404 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 RFTN1Q14699 578 aaPredicted RBP10.36□□□□□ -0.75
CALD1-203ENST00000393118 ANKDD1AQ495B1 522 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 TJAP1Q5JTD0 557 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 ZNF549Q6P9A3 640 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 CMTM8Q8IZV2 173 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 BPIFB6Q8NFQ5 453 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 PSMA8Q8TAA3 256 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 PNPT1Q8TCS8 783 aaKnown RBP10.36□□□□□ -0.75
CALD1-203ENST00000393118 TPD52L3Q96J77 140 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 GPR78Q96P69 363 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 LRTM1Q9HBL6 345 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 SPG21Q9NZD8 308 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 NUDT4Q9NZJ9 180 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 ADGRE2Q9UHX3 823 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 PSME4Q14997 1843 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 CST1P01037 141 aa10.36□□□□□ -0.75
CALD1-203ENST00000393118 DDX5P17844 614 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms