RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 NME6O75414 186 aaPredicted RBP12.94□□□□□ -0.34
LCA5-202ENST00000392959 AOC1P19801 751 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 AKR1D1P51857 326 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 PPP2R2BQ00005 443 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 PTGES3Q15185 160 aaKnown RBP12.94□□□□□ -0.34
LCA5-202ENST00000392959 SOWAHAQ2M3V2 549 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 SLC9A4Q6AI14 798 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 C6orf89Q6UWU4 347 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 FRMD7Q6ZUT3 714 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 ERI1Q8IV48 349 aaKnown RBP12.94□□□□□ -0.34
LCA5-202ENST00000392959 GJD3Q8N144 294 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 PACRGLQ8N7B6 248 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 DNAJB8Q8NHS0 232 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 PIK3R3Q92569 461 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 ZNF570Q96NI8 536 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 GSDMCQ9BYG8 508 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 GTF2IRD1Q9UHL9 959 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 SNX7Q9UNH6 387 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 MAN2B2Q9Y2E5 1009 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 SHPRHQ149N8 1683 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 MCIDASD6RGH6 385 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 PIGRP01833 764 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 EFNA1P20827 205 aaPredicted RBP12.94□□□□□ -0.34
LCA5-202ENST00000392959 ITPKBP27987 946 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 CCR10P46092 362 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 MYOM1P52179 1685 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 TOMM20Q15388 145 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 CHST15Q7LFX5 561 aaPredicted RBP12.94□□□□□ -0.34
LCA5-202ENST00000392959 HID1Q8IV36 788 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 ZNF384Q8TF68 577 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 SLC9A6Q92581 669 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 TMCO6Q96DC7 493 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 C8orf48Q96LL4 319 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 ZNF354BQ96LW1 612 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 MED28Q9H204 178 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 SLC35C2Q9NQQ7 365 aa12.94□□□□□ -0.34
LCA5-202ENST00000392959 SOWAHBA6NEL2 793 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 PGRP06401 933 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 CTNNB1P35222 781 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 PNLIPRP1P54315 467 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 SLC18A2Q05940 514 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 PUDPQ08623 228 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 KCNJ11Q14654 390 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 TAF1AQ15573 450 aaPredicted RBP12.93□□□□□ -0.34
LCA5-202ENST00000392959 RFKQ969G6 155 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 TNKS2Q9H2K2 1166 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 RMI1Q9H9A7 625 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 CCDC177Q9NQR7 707 aaPredicted RBP12.93□□□□□ -0.34
LCA5-202ENST00000392959 TEX264Q9Y6I9 313 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 MRC1P22897 1456 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 FAM172BPA6NC97 362 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 FAM25EA8MYX2 175 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 SIX3O95343 332 aaPredicted RBP12.93□□□□□ -0.34
LCA5-202ENST00000392959 CFHP08603 1231 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 SCNN1AP37088 669 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 NSG1P42857 185 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 ZBED5Q49AG3 693 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 SYPL2Q5VXT5 272 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 PAQR3Q6TCH7 311 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 KLHL24Q6TFL4 600 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 TMEM110Q86TL2 294 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 FEM1CQ96JP0 617 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 C1orf21Q9H246 121 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 AMBNQ9NP70 447 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 A8MT66 165 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 PDLIM1O00151 329 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 GADD45GO95257 159 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 ADH1CP00326 375 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 SPATA31D3P0C874 917 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 GNAZP19086 355 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 KELP23276 732 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 LAPTM5Q13571 262 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.93□□□□□ -0.34
LCA5-202ENST00000392959 CES5AQ6NT32 575 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 SPATA31D4Q6ZUB0 917 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 DPF3Q92784 378 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 LRRC58Q96CX6 371 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 TBC1D14Q9P2M4 693 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 EFCAB9A8MZ26 197 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 K7EPI3 171 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 CCNDBP1O95273 360 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 CXCL14O95715 111 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 GLUD1P00367 558 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 C8GP07360 202 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 CD247P20963 164 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 SP3Q02447 781 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 E2F2Q14209 437 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 HEPACAMQ14CZ8 416 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 NCBP2-AS2Q69YL0 99 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 PHYKPLQ8IUZ5 450 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 CFAP206Q8IYR0 622 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 RGL4Q8IZJ4 473 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 HAPLN3Q96S86 360 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 TMEM209Q96SK2 561 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 CNPPD1Q9BV87 410 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 YTHDF1Q9BYJ9 559 aaKnown RBP12.93□□□□□ -0.34
LCA5-202ENST00000392959 AKTIPQ9H8T0 292 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 DEC1Q9P2X7 70 aa12.93□□□□□ -0.34
LCA5-202ENST00000392959 H0YGN5 161 aa12.92□□□□□ -0.34
LCA5-202ENST00000392959 IRAK2O43187 625 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms