RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 KATNBL1Q9H079 304 aa14.55□□□□□ -0.08
CCDC50-201ENST00000392455 TAS2R1Q9NYW7 299 aa14.55□□□□□ -0.08
CCDC50-201ENST00000392455 NUFIP1Q9UHK0 495 aaKnown RBP14.55□□□□□ -0.08
CCDC50-201ENST00000392455 HYKKA2RU49 373 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 VNN2O95498 520 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 PIM1P11309 404 aaPredicted RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 GSTM3P21266 225 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 YAP1P46937 504 aaKnown RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 ERVK-9P63128 1117 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 UNC5BQ8IZJ1 945 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 DUXAA6NLW8 204 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 NRP2O60462 931 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 RARRES1P49788 294 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 ZNF844Q08AG5 666 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 CERS6Q6ZMG9 384 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 SAPCD2Q86UD0 394 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 MALSU1Q96EH3 234 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 LACRTQ9GZZ8 138 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 NWD1Q149M9 1564 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 ADM5C9JUS6 153 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 SCELO95171 688 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 CMPK1P30085 196 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 DCDC1P59894 354 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 FAAP100Q0VG06 881 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 RAB31Q13636 194 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 IKBKEQ14164 716 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 SPATS1Q496A3 300 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 GALNT6Q8NCL4 622 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 VRK1Q99986 396 aaPredicted RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 ZNF670Q9BS34 389 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 RAB11FIP5Q9BXF6 653 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 DHX33Q9H6R0 707 aaKnown RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 AGTR1P30556 359 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 UGT1A3P35503 534 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 MSL3Q8N5Y2 521 aaKnown RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 S100A16Q96FQ6 103 aaKnown RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 TPK1Q9H3S4 243 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 PHPT1Q9NRX4 125 aaPredicted RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 GDAP2Q9NXN4 497 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 ZNF69Q9UC07 566 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 A0A075B6Q4 140 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 C17orf113A0A1B0GUU1 675 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 BHMG1C9JSJ3 638 aaPredicted RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 NME6O75414 186 aaPredicted RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 SLC35G6P0C7Q6 338 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 CCNB1P14635 433 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 GLDCP23378 1020 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 PSMB4P28070 264 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 PFKPQ01813 784 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 PITRM1Q5JRX3 1037 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 UBXN11Q5T124 520 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 ZBED6CLQ96FA7 236 aaPredicted RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 MFSD14AQ96MC6 490 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 MTFR1LQ9H019 292 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 PDP1Q9P0J1 537 aaPredicted RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 ATP6AP2A0A1C7CYW4 349 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 GNPDA1P46926 289 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 RBM48Q5RL73 367 aaKnown RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 RAP1GAP2Q684P5 730 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 ZNF550Q7Z398 422 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 UNC93AQ86WB7 457 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 CPSF7Q8N684 471 aaKnown RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 ASB15Q8WXK1 588 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 FAM124BQ9H5Z6 455 aaPredicted RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 E2F3O00716 465 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 PLGP00747 810 aaPredicted RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 CALCAP01258 141 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 CXCR3P49682 368 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 FERD3LQ96RJ6 166 aa14.54□□□□□ -0.08
CCDC50-201ENST00000392455 YTHDF1Q9BYJ9 559 aaKnown RBP14.54□□□□□ -0.08
CCDC50-201ENST00000392455 RARAP10276 462 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 MAD2L1BPQ15013 274 aaPredicted RBP14.53□□□□□ -0.08
CCDC50-201ENST00000392455 SPIN3Q5JUX0 258 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 TATDN1Q6P1N9 297 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 BPIFA1Q9NP55 256 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 HPSEQ9Y251 543 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 ISM1B1AKI9 464 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 MFSD8Q8NHS3 518 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 B3GNT4Q9C0J1 378 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 ACTR6Q9GZN1 396 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 FAM105AQ9NUU6 356 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 MIOSQ9NXC5 875 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 PCYOX1Q9UHG3 505 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 NR2E3Q9Y5X4 410 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 ASXL3Q9C0F0 2248 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 ACKR2O00590 384 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 ARL6IP5O75915 188 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 CNTN2Q02246 1040 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 DPYSL3Q14195 570 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 MAP1SQ66K74 1059 aaPredicted RBP14.53□□□□□ -0.08
CCDC50-201ENST00000392455 PTGR2Q8N8N7 351 aaPredicted RBP14.53□□□□□ -0.08
CCDC50-201ENST00000392455 ETNK2Q9NVF9 386 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 NINJ2Q9NZG7 142 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 ZNF282Q9UDV7 671 aaPredicted RBP14.53□□□□□ -0.08
CCDC50-201ENST00000392455 PADI2Q9Y2J8 665 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 ZSCAN5BA6NJL1 495 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 EIF1AYO14602 144 aaKnown RBP14.53□□□□□ -0.08
CCDC50-201ENST00000392455 RBL1P28749 1068 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 EIF1AXP47813 144 aaKnown RBP14.53□□□□□ -0.08
CCDC50-201ENST00000392455 SLC9A3P48764 834 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms