RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 ACADVLP49748 655 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 DDX39BQ13838 428 aaKnown RBP11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 TMEM240Q5SV17 173 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 GLYATQ6IB77 296 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 MBOAT1Q6ZNC8 495 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 GPR141Q7Z602 305 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 SIX5Q8N196 739 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 ADAMTS19Q8TE59 1207 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 CDK5RAP1Q96SZ6 601 aaKnown RBP11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 CCDC90BQ9GZT6 254 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 INTS10Q9NVR2 710 aaKnown RBP11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 LIMD1Q9UGP4 676 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 VPS9D1Q9Y2B5 631 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 RNF11Q9Y3C5 154 aa11.9□□□□□ -0.51
CAPRIN1-202ENST00000389645 PTPRSQ13332 1948 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 MIA3Q5JRA6 1907 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 GRXCR1A8MXD5 290 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 TLL1O43897 1013 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 ARHGEF15O94989 841 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 EPOP01588 193 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 C8AP07357 584 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 UROSP10746 265 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 PPM1AP35813 382 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 RGS4P49798 205 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 NAA20P61599 178 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 FPGSQ05932 587 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 HSPA14Q0VDF9 509 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 TRAP1Q12931 704 aaKnown RBP11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 GRM2Q14416 872 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 C6orf136Q5SQH8 315 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 PRMT9Q6P2P2 845 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 ERMP1Q7Z2K6 904 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 SERPINA9Q86WD7 417 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 DHRSXQ8N5I4 330 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 SMYD1Q8NB12 490 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 SMOXQ9NWM0 555 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 FNIP2Q9P278 1114 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 FADS3Q9Y5Q0 445 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 LTBP2Q14767 1821 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 A0A1W2PP18 115 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 A0A1W2PQ67 120 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 BBIP1A8MTZ0 92 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 EIF3FO00303 357 aaPredicted RBP11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 EFCAB14O75071 495 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 LRATO95237 230 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 ALBP02768 609 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 PCSK6P29122 969 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 CTNNB1P35222 781 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 SLC26A3P40879 764 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 AARS2Q5JTZ9 985 aaKnown RBP11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 ZNF697Q5TEC3 545 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 KANK2Q63ZY3 851 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 LETMD1Q6P1Q0 360 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 ANKRD46Q86W74 232 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 OR4F6Q8NGB9 312 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 WFDC5Q8TCV5 224 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 TRMT2BQ96GJ1 504 aaKnown RBP11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 CLK4Q9HAZ1 481 aaKnown RBP11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 WARS2Q9UGM6 360 aaKnown RBP11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 WDR37Q9Y2I8 494 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 INSL6Q9Y581 213 aa11.89□□□□□ -0.51
CAPRIN1-202ENST00000389645 NOL3O60936 208 aaKnown RBP11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 LRG1P02750 347 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 C8BP07358 591 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 ERVPABLB-1P60509 514 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 TIAL1Q01085 375 aaKnown RBP eCLIP11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 NANOGP8Q6NSW7 305 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 BLOC1S3Q6QNY0 202 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 KREMEN2Q8NCW0 462 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 OR2T11Q8NH01 316 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 RHEBL1Q8TAI7 183 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 ITFG1Q8TB96 612 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 OVCA2Q8WZ82 227 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 MGME1Q9BQP7 344 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 C9orf16Q9BUW7 83 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 CHID1Q9BWS9 393 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 ACTR8Q9H981 624 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 NANOGQ9H9S0 305 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 TLR9Q9NR96 1032 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 SDR39U1Q9NRG7 319 aaPredicted RBP11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 MAGED1Q9Y5V3 778 aaPredicted RBP11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 ANAPC1Q9H1A4 1944 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 TCRBV3S1A0A5B6 114 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 HTR3EA5X5Y0 456 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 VILLO15195 856 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 TRMUO75648 421 aaKnown RBP11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 CLDN7O95471 211 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 ZNF7P17097 686 aaPredicted RBP11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 CSKP41240 450 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 ZNF140P52738 457 aaPredicted RBP11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 OR4D2P58180 307 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 GALNT1Q10472 559 aaPredicted RBP11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 BOP1Q14137 746 aaKnown RBP11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 AASDHQ4L235 1098 aaPredicted RBP11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 GPR107Q5VW38 600 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 GCNT7Q6ZNI0 430 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 FAM162AQ96A26 154 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 NDEL1Q9GZM8 345 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 POLR1BQ9H9Y6 1135 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 CD300AQ9UGN4 299 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms