RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 KLK8O60259 260 aa26.27■■□□□ 1.8
MSX1-201ENST00000382723 TGDSO95455 350 aa26.27■■□□□ 1.8
MSX1-201ENST00000382723 VCLP18206 1134 aa26.27■■□□□ 1.8
MSX1-201ENST00000382723 TSPAN8P19075 237 aa26.27■■□□□ 1.8
MSX1-201ENST00000382723 AKT2P31751 481 aa26.27■■□□□ 1.8
MSX1-201ENST00000382723 ALDH18A1P54886 795 aaKnown RBP26.27■■□□□ 1.8
MSX1-201ENST00000382723 NFE2L1Q14494 772 aa26.27■■□□□ 1.8
MSX1-201ENST00000382723 FOXR1Q6PIV2 292 aa26.27■■□□□ 1.8
MSX1-201ENST00000382723 NEK10Q6ZWH5 1172 aa26.27■■□□□ 1.8
MSX1-201ENST00000382723 ESAMQ96AP7 390 aa26.27■■□□□ 1.8
MSX1-201ENST00000382723 EGFL8Q99944 293 aa26.27■■□□□ 1.8
MSX1-201ENST00000382723 GSTO2Q9H4Y5 243 aa26.27■■□□□ 1.8
MSX1-201ENST00000382723 KLHL14Q9P2G3 628 aa26.27■■□□□ 1.8
MSX1-201ENST00000382723 SLC23A2Q9UGH3 650 aa26.27■■□□□ 1.8
MSX1-201ENST00000382723 INVSQ9Y283 1065 aa26.27■■□□□ 1.8
MSX1-201ENST00000382723 IGHV1OR15-9A0A0B4J2B8 117 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 MGAT4DA6NG13 374 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 ERICH4A6NGS2 130 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 FUCA1P04066 466 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 C8GP07360 202 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 MPSTP25325 297 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 C18orf21Q32NC0 220 aaPredicted RBP26.26■■□□□ 1.79
MSX1-201ENST00000382723 AMZ2Q86W34 360 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 SLC22A15Q8IZD6 547 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 HM13Q8TCT9 377 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 BMFQ96LC9 184 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 MRPL40Q9NQ50 206 aaKnown RBP26.26■■□□□ 1.79
MSX1-201ENST00000382723 TMCO1Q9UM00 188 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 C17orf113A0A1B0GUU1 675 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 H3BM21 787 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 CEACAM5P06731 702 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 CCR5P51681 352 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 CDH13P55290 713 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 MBOAT1Q6ZNC8 495 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 FAM83HQ6ZRV2 1179 aaPredicted RBP26.26■■□□□ 1.79
MSX1-201ENST00000382723 FRMD7Q6ZUT3 714 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 PIWIL2Q8TC59 973 aaKnown RBP26.26■■□□□ 1.79
MSX1-201ENST00000382723 BIRC7Q96CA5 298 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 ILKAPQ9H0C8 392 aaPredicted RBP26.26■■□□□ 1.79
MSX1-201ENST00000382723 PDE10AQ9Y233 779 aa26.26■■□□□ 1.79
MSX1-201ENST00000382723 A0A0G2JND7 137 aa26.25■■□□□ 1.79
MSX1-201ENST00000382723 GSTM1P09488 218 aa26.25■■□□□ 1.79
MSX1-201ENST00000382723 GSTM4Q03013 218 aa26.25■■□□□ 1.79
MSX1-201ENST00000382723 SETDB1Q15047 1291 aa26.25■■□□□ 1.79
MSX1-201ENST00000382723 XKR5Q6UX68 686 aa26.25■■□□□ 1.79
MSX1-201ENST00000382723 ZNF771Q7L3S4 317 aaPredicted RBP26.25■■□□□ 1.79
MSX1-201ENST00000382723 NSUN5Q96P11 429 aaKnown RBP26.25■■□□□ 1.79
MSX1-201ENST00000382723 SLC12A9Q9BXP2 914 aa26.25■■□□□ 1.79
MSX1-201ENST00000382723 PARVBQ9HBI1 364 aa26.25■■□□□ 1.79
MSX1-201ENST00000382723 SLC17A4Q9Y2C5 497 aa26.25■■□□□ 1.79
MSX1-201ENST00000382723 C10orf142B7Z368 130 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 GPR89AB7ZAQ6 455 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 STX16-NPEPL1H3BU86 382 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 STX16O14662 325 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 KMOO15229 486 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 PDGFBP01127 241 aaPredicted RBP26.24■■□□□ 1.79
MSX1-201ENST00000382723 GPR89BP0CG08 455 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 RPIAP49247 311 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 GCNT7Q6ZNI0 430 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 CHST15Q7LFX5 561 aaPredicted RBP26.24■■□□□ 1.79
MSX1-201ENST00000382723 ANKS4BQ8N8V4 417 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 SNX19Q92543 992 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 RDH14Q9HBH5 336 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 ARL15Q9NXU5 204 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 RAP2CQ9Y3L5 183 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 VCANP13611 3396 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 GFYI3L273 518 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 MATN4O95460 622 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 SERPINB5P36952 375 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 CXCL12P48061 93 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 PDPRQ8NCN5 879 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 TRIM54Q9BYV2 358 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 EIF2B4Q9UI10 523 aaKnown RBP26.24■■□□□ 1.79
MSX1-201ENST00000382723 ZDHHC2Q9UIJ5 367 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 ARL2BPQ9Y2Y0 163 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 ASB1Q9Y576 335 aa26.24■■□□□ 1.79
MSX1-201ENST00000382723 PABPN1LA6NDY0 278 aaKnown RBP26.23■■□□□ 1.79
MSX1-201ENST00000382723 CYP2A7P20853 494 aa26.23■■□□□ 1.79
MSX1-201ENST00000382723 SP140Q13342 867 aa26.23■■□□□ 1.79
MSX1-201ENST00000382723 ANKS6Q68DC2 871 aa26.23■■□□□ 1.79
MSX1-201ENST00000382723 WDR75Q8IWA0 830 aaKnown RBP26.23■■□□□ 1.79
MSX1-201ENST00000382723 CAMKK1Q8N5S9 505 aa26.23■■□□□ 1.79
MSX1-201ENST00000382723 DEFB119Q8N690 84 aa26.23■■□□□ 1.79
MSX1-201ENST00000382723 C10orf82Q8WW14 230 aa26.23■■□□□ 1.79
MSX1-201ENST00000382723 SUFUQ9UMX1 484 aa26.23■■□□□ 1.79
MSX1-201ENST00000382723 KRT87PA6NCN2 255 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 SCAMP1O15126 338 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 SLC16A5O15375 505 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 ENO2P09104 434 aaPredicted RBP26.22■■□□□ 1.79
MSX1-201ENST00000382723 HIST1H2AGP0C0S8 130 aaPredicted RBP26.22■■□□□ 1.79
MSX1-201ENST00000382723 ACP5P13686 325 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 HIST1H2ADP20671 130 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 AQP5P55064 265 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 KIAA1024LP59773 190 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 PRKAA1Q13131 559 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 ENPP7Q6UWV6 458 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 GALNT13Q8IUC8 556 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 HIST1H2AHQ96KK5 128 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 FOPNLQ96NB1 174 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 HIST1H2AJQ99878 128 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms