RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 MAP3K3Q99759 626 aa12.67□□□□□ -0.38
RPAIN-202ENST00000381208 GORASP1Q9BQQ3 440 aa12.67□□□□□ -0.38
RPAIN-202ENST00000381208 TUBB2BQ9BVA1 445 aa12.67□□□□□ -0.38
RPAIN-202ENST00000381208 LRRC40Q9H9A6 602 aa12.67□□□□□ -0.38
RPAIN-202ENST00000381208 FANCEQ9HB96 536 aa12.67□□□□□ -0.38
RPAIN-202ENST00000381208 LHX9Q9NQ69 397 aa12.67□□□□□ -0.38
RPAIN-202ENST00000381208 FGF21Q9NSA1 209 aa12.67□□□□□ -0.38
RPAIN-202ENST00000381208 ZDHHC3Q9NYG2 299 aa12.67□□□□□ -0.38
RPAIN-202ENST00000381208 TFR2Q9UP52 801 aa12.67□□□□□ -0.38
RPAIN-202ENST00000381208 F8W8V4 182 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 CPNE3O75131 537 aaKnown RBP12.66□□□□□ -0.38
RPAIN-202ENST00000381208 KATNA1O75449 491 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 CREG1O75629 220 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 FOLR1P15328 257 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 CASRP41180 1078 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 RPS15P62841 145 aaKnown RBP12.66□□□□□ -0.38
RPAIN-202ENST00000381208 KIF5AQ12840 1032 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 MSLNQ13421 630 aaPredicted RBP12.66□□□□□ -0.38
RPAIN-202ENST00000381208 LAMB3Q13751 1172 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 PTPRCAPQ14761 206 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 LACTB2Q53H82 288 aaPredicted RBP12.66□□□□□ -0.38
RPAIN-202ENST00000381208 LRRC57Q8N9N7 239 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 OR13C4Q8NGS5 318 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 THAP4Q8WY91 577 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 ELMO2Q96JJ3 720 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 LRFN5Q96NI6 719 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 ALS2CR12Q96Q35 445 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 APOL2Q9BQE5 337 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 C10orf88Q9H8K7 445 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 C1GALT1Q9NS00 363 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 BTRCQ9Y297 605 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 KCNMB2Q9Y691 235 aa12.66□□□□□ -0.38
RPAIN-202ENST00000381208 TENM4Q6N022 2769 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 NBASA2RRP1 2371 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 IGLV3-16A0A075B6K0 115 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 TRBV5-4A0A0C4DH59 114 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 PIPSLA2A3N6 862 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 GRID2IPA4D2P6 1211 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 OR6C74A6NCV1 312 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 RCCD1A6NED2 376 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 LDB2O43679 373 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 AP2A2O94973 939 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 KLK3P07288 261 aaPredicted RBP12.65□□□□□ -0.38
RPAIN-202ENST00000381208 MSL3P1P0C860 447 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 F8A1P23610 371 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 MC4RP32245 332 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 CA5AP35218 305 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 GSDMDP57764 484 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 NFKB2Q00653 900 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 PLOD1Q02809 727 aaPredicted RBP12.65□□□□□ -0.38
RPAIN-202ENST00000381208 TLE1Q04724 770 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 KCTD11Q693B1 232 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 DENND5AQ6IQ26 1287 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 TCTN3Q6NUS6 607 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 LINC00523Q86TU6 105 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 STYXQ8WUJ0 223 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 ALG3Q92685 438 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 ABHD17AQ96GS6 310 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 RMDN2Q96LZ7 410 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 BAG1Q99933 345 aaPredicted RBP12.65□□□□□ -0.38
RPAIN-202ENST00000381208 LACRTQ9GZZ8 138 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 MVB12BQ9H7P6 319 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 KCND1Q9NSA2 647 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 POMT2Q9UKY4 750 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 CFAP20Q9Y6A4 193 aaKnown RBP12.65□□□□□ -0.38
RPAIN-202ENST00000381208 DUSP10Q9Y6W6 482 aa12.65□□□□□ -0.38
RPAIN-202ENST00000381208 ERI2A8K979 691 aaKnown RBP12.64□□□□□ -0.39
RPAIN-202ENST00000381208 SGTAO43765 313 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 RFPL1O75677 317 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 GAS8O95995 478 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 POLBP06746 335 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 EBLN1P0CF75 366 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 ACRV1P26436 265 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 STIP1P31948 543 aaKnown RBP12.64□□□□□ -0.39
RPAIN-202ENST00000381208 NSG1P42857 185 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 PMS2P54278 862 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 PPP1CAP62136 330 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 CACNG1Q06432 222 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 ERV3-1Q14264 604 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 ITIH4Q14624 930 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 SKIDA1Q1XH10 827 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 ZRANB3Q5FWF4 1079 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 PWWP2BQ6NUJ5 590 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 RAD9BQ6WBX8 426 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 SYVN1Q86TM6 617 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 PTRH1Q86Y79 214 aaKnown RBP12.64□□□□□ -0.39
RPAIN-202ENST00000381208 TMEM126BQ8IUX1 230 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 APLFQ8IW19 511 aaPredicted RBP12.64□□□□□ -0.39
RPAIN-202ENST00000381208 CT55Q8WUE5 264 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 LCN9Q8WX39 176 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.64□□□□□ -0.394e-10■■■■■ 86.3
RPAIN-202ENST00000381208 TTC1Q99614 292 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 FRMD8P1Q9BZ68 369 aaPredicted RBP12.64□□□□□ -0.39
RPAIN-202ENST00000381208 TRIM4Q9C037 500 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 TWSG1Q9GZX9 223 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 SRMSQ9H3Y6 488 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 TFB2MQ9H5Q4 396 aaKnown RBP12.64□□□□□ -0.39
RPAIN-202ENST00000381208 COG4Q9H9E3 785 aa12.64□□□□□ -0.39
RPAIN-202ENST00000381208 NLE1Q9NVX2 485 aaPredicted RBP12.64□□□□□ -0.39
RPAIN-202ENST00000381208 SOHLH2Q9NX45 425 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms