RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 PTSQ03393 145 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 NR6A1Q15406 480 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 GGTA1PQ4G0N0 100 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 MTX3Q5HYI7 312 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 PLEKHS1Q5SXH7 462 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 INTS11Q5TA45 600 aaKnown RBP13.1□□□□□ -0.31
LCMT1-201ENST00000380962 FBXL19Q6PCT2 694 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 CYP20A1Q6UW02 462 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 TSPAN33Q86UF1 283 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 HID1Q8IV36 788 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 RAVER1Q8IY67 606 aaKnown RBP13.1□□□□□ -0.31
LCMT1-201ENST00000380962 PAPD5Q8NDF8 572 aaKnown RBP13.1□□□□□ -0.31
LCMT1-201ENST00000380962 DNAJB8Q8NHS0 232 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 SP7Q8TDD2 431 aaPredicted RBP13.1□□□□□ -0.31
LCMT1-201ENST00000380962 IRF7Q92985 503 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 POP5Q969H6 163 aaKnown RBP13.1□□□□□ -0.31
LCMT1-201ENST00000380962 TIFAQ96CG3 184 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 ZBTB18Q99592 522 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 EGFL8Q99944 293 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 SLC39A3Q9BRY0 314 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 BRD9Q9H8M2 597 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 ELOVL2Q9NXB9 296 aa13.1□□□□□ -0.31
LCMT1-201ENST00000380962 EIF3LQ9Y262 564 aaKnown RBP13.1□□□□□ -0.31
LCMT1-201ENST00000380962 SMIM31A0A1B0GVY4 71 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 SERTM1A2A2V5 107 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 EIF4E1BA6NMX2 242 aaKnown RBP13.09□□□□□ -0.31
LCMT1-201ENST00000380962 CFAP99D6REC4 459 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 ANKRD28O15084 1053 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 STK16O75716 305 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 HNRNPA1P09651 372 aaKnown RBP eCLIP13.09□□□□□ -0.31
LCMT1-201ENST00000380962 ZCCHC18P0CG32 403 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 ACPPP15309 386 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 EPB42P16452 691 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 GKP32189 559 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 GRIA3P42263 894 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 CTSOP43234 321 aaPredicted RBP13.09□□□□□ -0.31
LCMT1-201ENST00000380962 RECQLP46063 649 aaPredicted RBP13.09□□□□□ -0.31
LCMT1-201ENST00000380962 HSPA7P48741 367 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 STK19P49842 368 aaPredicted RBP13.09□□□□□ -0.31
LCMT1-201ENST00000380962 HNMTP50135 292 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 TXNL4AP83876 142 aaKnown RBP13.09□□□□□ -0.31
LCMT1-201ENST00000380962 UBE3AQ05086 875 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 MAP7Q14244 749 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 FBXO48Q5FWF7 155 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 PPP4R4Q6NUP7 873 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 GDPD4Q6W3E5 623 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 DPY19L3Q6ZPD9 716 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 CLDN19Q8N6F1 224 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 MRPL43Q8N983 215 aaKnown RBP13.09□□□□□ -0.31
LCMT1-201ENST00000380962 OR8J3Q8NGG0 315 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 LRTOMTQ8WZ04 291 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 USP7Q93009 1102 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 ESAMQ96AP7 390 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 ARMC5Q96C12 935 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 LRIG1Q96JA1 1093 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 KCTD14Q9BQ13 255 aaPredicted RBP13.09□□□□□ -0.31
LCMT1-201ENST00000380962 SLC12A9Q9BXP2 914 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 ALG2Q9H553 416 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 SPHK2Q9NRA0 654 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 TDP1Q9NUW8 608 aa13.09□□□□□ -0.31
LCMT1-201ENST00000380962 ZNF839A8K0R7 811 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 SLC9A3R1O14745 358 aaPredicted RBP13.08□□□□□ -0.31
LCMT1-201ENST00000380962 ARPC2O15144 300 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 CCL16O15467 120 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 MOSPD3O75425 235 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 KRT6AP02538 564 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 KRT6BP04259 564 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 C1SP09871 688 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 PABPC4LP0CB38 370 aaKnown RBP13.08□□□□□ -0.31
LCMT1-201ENST00000380962 ITGB6P18564 788 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 LHCGRP22888 699 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 VARSP26640 1264 aaKnown RBP13.08□□□□□ -0.31
LCMT1-201ENST00000380962 AOAHP28039 575 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 IL12AP29459 219 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 VIPR1P32241 457 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 KRT6CP48668 564 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 GSK3BP49841 420 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 HTR6P50406 440 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 ATXN3P54252 364 aaPredicted RBP13.08□□□□□ -0.31
LCMT1-201ENST00000380962 SH3BGRP55822 239 aaPredicted RBP13.08□□□□□ -0.31
LCMT1-201ENST00000380962 AP1S2P56377 157 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 LIPEQ05469 1076 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 ZNF33BQ06732 778 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 PPIGQ13427 754 aaKnown RBP eCLIP13.08□□□□□ -0.312e-7■■□□□ 11.8
LCMT1-201ENST00000380962 ZNF77Q15935 545 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 ADRM1Q16186 407 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 PHKG1Q16816 387 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 AP5B1Q2VPB7 878 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 LIN52Q52LA3 116 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 PAGE3Q5JUK9 113 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 CYP2R1Q6VVX0 501 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 TMEM25Q86YD3 366 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 MFSD2AQ8NA29 543 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 TRPV3Q8NET8 790 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 CANT1Q8WVQ1 401 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 CCDC97Q96F63 343 aaPredicted RBP13.08□□□□□ -0.31
LCMT1-201ENST00000380962 LRCH3Q96II8 777 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 RPL10LQ96L21 214 aaKnown RBP13.08□□□□□ -0.31
LCMT1-201ENST00000380962 TEX37Q96LM6 180 aa13.08□□□□□ -0.31
LCMT1-201ENST00000380962 TCF25Q9BQ70 676 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms