RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 PSAPL1Q6NUJ1 521 aa13.96□□□□□ -0.18
SHROOM1-203ENST00000378679 RALGPS2Q86X27 583 aaPredicted RBP13.96□□□□□ -0.18
SHROOM1-203ENST00000378679 ZNF276Q8N554 614 aa13.96□□□□□ -0.18
SHROOM1-203ENST00000378679 MRPL43Q8N983 215 aaKnown RBP13.96□□□□□ -0.18
SHROOM1-203ENST00000378679 OR9Q1Q8NGQ5 310 aa13.96□□□□□ -0.18
SHROOM1-203ENST00000378679 ZNF641Q96N77 438 aaPredicted RBP13.96□□□□□ -0.18
SHROOM1-203ENST00000378679 SLC46A2Q9BY10 475 aa13.96□□□□□ -0.18
SHROOM1-203ENST00000378679 ADPRHL2Q9NX46 363 aa13.96□□□□□ -0.18
SHROOM1-203ENST00000378679 DRGXA6NNA5 263 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 DHCR24Q15392 516 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 ZCCHC8Q6NZY4 707 aaKnown RBP13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 KIAA2013Q8IYS2 634 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 EID3Q8N140 333 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 ARL10Q8N8L6 244 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 FIBINQ8TAL6 211 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 WDR60Q8WVS4 1066 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 NLNQ9BYT8 704 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 CCDC177Q9NQR7 707 aaPredicted RBP13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 MAFFQ9ULX9 164 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 LINGO3P0C6S8 592 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 PHTF2Q8N3S3 785 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 LPGAT1Q92604 370 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 SIPA1Q96FS4 1042 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 AIF1LQ9BQI0 150 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 KLF16Q9BXK1 252 aaPredicted RBP13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 NUSAP1Q9BXS6 441 aaKnown RBP13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 DERL2Q9GZP9 239 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 A0A0U1RQS6 177 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 HEPACAM2A8MVW5 462 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 SMAD6O43541 496 aaKnown RBP13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 HMGCLP35914 325 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 SSR2P43308 183 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 BNIP2Q12982 314 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 TGFBIQ15582 683 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 KDELC1Q6UW63 502 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 ITCHQ96J02 903 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 C9orf16Q9BUW7 83 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 AKTIPQ9H8T0 292 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 NDOR1Q9UHB4 597 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 SPO11Q9Y5K1 396 aa13.95□□□□□ -0.18
SHROOM1-203ENST00000378679 WASH4PA8MWX3 477 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 MATN2O00339 956 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 PRSS56P0CW18 603 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 RRM2P31350 389 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 NEDD8Q15843 81 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 ATAD3BQ5T9A4 648 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 CHSY3Q70JA7 882 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 OR2T12Q8NG77 320 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 LINC01599Q8WXQ3 324 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 SMARCD2Q92925 531 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 TUBGCP5Q96RT8 1024 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 SLC22A12Q96S37 553 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 OLFM1Q99784 485 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 MGME1Q9BQP7 344 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 PAPPA2Q9BXP8 1791 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 A0A1B0GVG6 124 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 LRRC72A6NJI9 287 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 POP7O75817 140 aaKnown RBP13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 RASGRP1O95267 797 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 GSTM1P09488 218 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 DNAJB1P25685 340 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 GJA8P48165 433 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 ZNF789Q5FWF6 425 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 CCDC81Q6ZN84 652 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 TRIM74Q86UV6 250 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 DHRSXQ8N5I4 330 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 MAGEE2Q8TD90 523 aaPredicted RBP13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 SAMD11Q96NU1 681 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 DDX28Q9NUL7 540 aaKnown RBP13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 NRXN2Q9P2S2 1712 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 ANKRD12Q6UB98 2062 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 A0A088AWK7 358 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 HS6ST1O60243 411 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 ANXA4P09525 319 aaPredicted RBP13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 ZNF10P21506 573 aaPredicted RBP13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 PWP1Q13610 501 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 SPIDRQ14159 915 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 MAPK11Q15759 364 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 LIN52Q52LA3 116 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 CPTPQ5TA50 214 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 AAGABQ6PD74 315 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 SATL1Q86VE3 508 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 NELL1Q92832 810 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 PPCDCQ96CD2 204 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 TCEAL4Q96EI5 215 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 AHCYL2Q96HN2 611 aaKnown RBP13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 RANBP9Q96S59 729 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 FAIM2Q9BWQ8 316 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 OSBPL6Q9BZF3 934 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 C1orf109Q9NX04 203 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 FBXL12Q9NXK8 326 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 SLC22A14Q9Y267 594 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 PCDHGA11Q9Y5H2 935 aa13.94□□□□□ -0.18
SHROOM1-203ENST00000378679 ATP6V1G1O75348 118 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 ACP5P13686 325 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 TNNI3P19429 210 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 EN2P19622 333 aaPredicted RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 GSSP48637 474 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 CCDC92Q53HC0 331 aaPredicted RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 ANKRD46Q86W74 232 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms