RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 SOX13Q9UN79 622 aa13.51□□□□□ -0.25
PRPF18-202ENST00000378572 RPL26L1Q9UNX3 145 aaKnown RBP13.51□□□□□ -0.25
PRPF18-202ENST00000378572 PLAAQ9Y263 795 aa13.51□□□□□ -0.25
PRPF18-202ENST00000378572 ZFC3H1O60293 1989 aaKnown RBP13.51□□□□□ -0.25
PRPF18-202ENST00000378572 FAM237BA0A1B0GVD1 139 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 B4E171 279 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 PRLP01236 227 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 PRKAR1AP10644 381 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 TSPAN7P41732 249 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 SPINT3P49223 89 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 MSLNQ13421 630 aaPredicted RBP13.5□□□□□ -0.25
PRPF18-202ENST00000378572 FRG1Q14331 258 aaKnown RBP13.5□□□□□ -0.25
PRPF18-202ENST00000378572 CLCA4Q14CN2 919 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 QPCTQ16769 361 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 PCID2Q5JVF3 399 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 SIRPB2Q5JXA9 342 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 HP1BP3Q5SSJ5 553 aaPredicted RBP13.5□□□□□ -0.25
PRPF18-202ENST00000378572 CRTC3Q6UUV7 619 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 C3orf62Q6ZUJ4 267 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 TMEM135Q86UB9 458 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 TRIM48Q8IWZ4 208 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 GSDMBQ8TAX9 411 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 KIFC1Q9BW19 673 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 GPN2Q9H9Y4 310 aaPredicted RBP13.5□□□□□ -0.25
PRPF18-202ENST00000378572 PPCSQ9HAB8 311 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 SARS2Q9NP81 518 aaKnown RBP13.5□□□□□ -0.25
PRPF18-202ENST00000378572 STARD5Q9NSY2 213 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 FETUBQ9UGM5 382 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 PCYT1BQ9Y5K3 369 aaPredicted RBP13.5□□□□□ -0.25
PRPF18-202ENST00000378572 MAD1L1Q9Y6D9 718 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 MYO18BQ8IUG5 2567 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 SPTA1P02549 2419 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 ZNF891A8MT65 544 aaPredicted RBP13.5□□□□□ -0.25
PRPF18-202ENST00000378572 FADS2P1A8MWK0 482 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 GRID2O43424 1007 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 DNAJC6O75061 913 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 USP1O94782 785 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 POLBP06746 335 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 ADRA1DP25100 572 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 SSTR1P30872 391 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 CHRNA4P43681 627 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 LAMB3Q13751 1172 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 INSCQ1MX18 579 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 SPANXN3Q5MJ09 141 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 UBAP2Q5T6F2 1119 aaKnown RBP13.5□□□□□ -0.25
PRPF18-202ENST00000378572 CASC4Q6P4E1 433 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 ZNF449Q6P9G9 518 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 CEACAM20Q6UY09 585 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 UNC5AQ6ZN44 842 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 LYSMD3Q7Z3D4 306 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 NLRP8Q86W28 1048 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 PEX13Q92968 403 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 TEFMQ96QE5 360 aaKnown RBP13.5□□□□□ -0.25
PRPF18-202ENST00000378572 RUFY1Q96T51 708 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 CCDC77Q9BR77 488 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.5□□□□□ -0.25
PRPF18-202ENST00000378572 ROPN1BQ9BZX4 212 aaPredicted RBP13.5□□□□□ -0.25
PRPF18-202ENST00000378572 OR2AG1Q9H205 316 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 RMI1Q9H9A7 625 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 VPS37BQ9H9H4 285 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 ROPN1Q9HAT0 212 aaPredicted RBP13.5□□□□□ -0.25
PRPF18-202ENST00000378572 PLAC1Q9HBJ0 212 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 PIH1D1Q9NWS0 290 aaKnown RBP13.5□□□□□ -0.25
PRPF18-202ENST00000378572 TCAF1Q9Y4C2 921 aa13.5□□□□□ -0.25
PRPF18-202ENST00000378572 HEATR9A2RTY3 570 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 PDZK1P1A8MUH7 402 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 PIRTP0C851 137 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 F3P13726 295 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 STX2P32856 288 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 CCR10P46092 362 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 CSRP3P50461 194 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 ARSDP51689 593 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 POLE2P56282 527 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 SEPT7Q16181 437 aaKnown RBP13.49□□□□□ -0.25
PRPF18-202ENST00000378572 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.49□□□□□ -0.25
PRPF18-202ENST00000378572 ZNF648Q5T619 568 aaPredicted RBP13.49□□□□□ -0.25
PRPF18-202ENST00000378572 HENMT1Q5T8I9 393 aaKnown RBP13.49□□□□□ -0.25
PRPF18-202ENST00000378572 NLRP9Q7RTR0 991 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 PTRH1Q86Y79 214 aaKnown RBP13.49□□□□□ -0.25
PRPF18-202ENST00000378572 NLGN4XQ8N0W4 816 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 SLC25A41Q8N5S1 370 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 PPHLN1Q8NEY8 458 aaKnown RBP13.49□□□□□ -0.25
PRPF18-202ENST00000378572 NLGN4YQ8NFZ3 816 aaPredicted RBP13.49□□□□□ -0.25
PRPF18-202ENST00000378572 RNF31Q96EP0 1072 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 TBC1D10AQ9BXI6 508 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 SLC12A9Q9BXP2 914 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 SLC25A18Q9H1K4 315 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 ACSS3Q9H6R3 686 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 KLC4Q9NSK0 619 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 IL17BQ9UHF5 180 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 RIMKLBQ9ULI2 386 aa13.49□□□□□ -0.25
PRPF18-202ENST00000378572 BOD1L1Q8NFC6 3051 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 KIR2DS5A0A0G2JLQ3 304 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 A0A0G2JNG1 304 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 TCRBV9S1A1TA0A576 114 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 ANKRD66B4E2M5 251 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 KIR2DS3K7RE56 304 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 AGPSO00116 658 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 SLC25A14O95258 325 aaPredicted RBP13.48□□□□□ -0.25
PRPF18-202ENST00000378572 TPH1P17752 444 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms