RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 LRRC32Q14392 662 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 SH3PXD2AQ5TCZ1 1133 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 APBB2Q92870 758 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 IPPKQ9H8X2 491 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 RAPGEFL1Q9UHV5 662 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 TNFP01375 233 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 PPIGQ13427 754 aaKnown RBP eCLIP16.11■□□□□ 0.17
RGP1-201ENST00000378078 PDGFRLQ15198 375 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 SPDYCQ5MJ68 293 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 TMEM164Q5U3C3 297 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 CLNKQ7Z7G1 428 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 CAPNS2Q96L46 248 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 CHRAC1Q9NRG0 131 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 ATXN7L1Q9ULK2 861 aaPredicted RBP16.11■□□□□ 0.17
RGP1-201ENST00000378078 BCKDKO14874 412 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 ENTPD5O75356 428 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 CSTF1Q05048 431 aaKnown RBP16.11■□□□□ 0.17
RGP1-201ENST00000378078 ARHGAP22Q7Z5H3 698 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 NET1Q7Z628 596 aaPredicted RBP16.11■□□□□ 0.17
RGP1-201ENST00000378078 SYVN1Q86TM6 617 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 CHCHD6Q9BRQ6 235 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 PRAMEF33A0A0G2JMD5 474 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 SMIM30A4D0T7 59 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 PRAMEF10O60809 474 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 NADKO95544 446 aaPredicted RBP16.11■□□□□ 0.17
RGP1-201ENST00000378078 FGF19O95750 216 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 CSKP41240 450 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 MAZP56270 477 aaKnown RBP16.11■□□□□ 0.17
RGP1-201ENST00000378078 TMEM156Q8N614 296 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 STRA6Q9BX79 667 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 TBL1XR1Q9BZK7 514 aa16.11■□□□□ 0.17
RGP1-201ENST00000378078 A0A1W2PPL8 197 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 BTBD19C9JJ37 291 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 ACSL1P33121 698 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 MATKP42679 507 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 OAZ1P54368 228 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 TTMPQ5BVD1 217 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 REP15Q6BDI9 236 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 FUT10Q6P4F1 479 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 OR8H3Q8N146 312 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 KBTBD8Q8NFY9 601 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 THEM6Q8WUY1 208 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 PFDN2Q9UHV9 154 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 LRRIQ1Q96JM4 1722 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 TNS2Q63HR2 1409 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 TRAFD1O14545 582 aaPredicted RBP16.1■□□□□ 0.17
RGP1-201ENST00000378078 KCNJ13O60928 360 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 ID2Q02363 134 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 GLYATQ6IB77 296 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 GPAT4Q86UL3 456 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 PIGXQ8TBF5 258 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 BORCS8Q96FH0 119 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 DUSP9Q99956 384 aaKnown RBP16.1■□□□□ 0.17
RGP1-201ENST00000378078 TVP23BQ9NYZ1 205 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 EIF2B4Q9UI10 523 aaKnown RBP16.1■□□□□ 0.17
RGP1-201ENST00000378078 HCN2Q9UL51 889 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 TCRBV5S4A2TA0A5A2 114 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 UBXN7O94888 489 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 VNN2O95498 520 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 SRCP12931 536 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 BST1Q10588 318 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 ITGB3BPQ13352 177 aaPredicted RBP16.1■□□□□ 0.17
RGP1-201ENST00000378078 OCLNQ16625 522 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 SLC9B1Q4ZJI4 515 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 STK32AQ8WU08 396 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 CCSER2Q9H7U1 834 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 TRPV5Q9NQA5 729 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 ELOA3DA6NLF2 546 aaPredicted RBP16.1■□□□□ 0.17
RGP1-201ENST00000378078 NME6O75414 186 aaPredicted RBP16.1■□□□□ 0.17
RGP1-201ENST00000378078 GSTT1P30711 240 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 PRKCZQ05513 592 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 LPAL2Q16609 132 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 ELOA3BQ3SY89 546 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 ARHGAP40Q5TG30 622 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 IL23RQ5VWK5 629 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 TMEM151BQ8IW70 566 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 ELOA3Q8NG57 546 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 CAVIN3Q969G5 261 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 NUS1Q96E22 293 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 MGME1Q9BQP7 344 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 TCF7L1Q9HCS4 588 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 GIN1Q9NXP7 522 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 ZNF639Q9UID6 485 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 KCNS2Q9ULS6 477 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 E7ENX8 843 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 IFI30P13284 250 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 CXCR1P25024 350 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 MLLT1Q03111 559 aaPredicted RBP16.1■□□□□ 0.17
RGP1-201ENST00000378078 PLEKHG6Q3KR16 790 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 C1orf189Q5VU69 101 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 ZNF567Q8N184 647 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 OR2T12Q8NG77 320 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 TRMT10AQ8TBZ6 339 aaKnown RBP16.1■□□□□ 0.17
RGP1-201ENST00000378078 CIB1Q99828 191 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 METTL7AQ9H8H3 244 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 TMEM98Q9Y2Y6 226 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 DIP2AQ14689 1571 aa16.1■□□□□ 0.17
RGP1-201ENST00000378078 C9J4A7 227 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 MUSKO15146 869 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 RENP00797 406 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms