RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 KATNBL1Q9H079 304 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 SP110Q9HB58 689 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.25■□□□□ 0.19
TRIM39-201ENST00000376656 PCDHB14Q9Y5E9 798 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 PPP2R3BQ9Y5P8 575 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 ANKRD36A6QL64 1941 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 STX16O14662 325 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 ANKRD28O15084 1053 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 FADS2O95864 444 aaKnown RBP16.25■□□□□ 0.19
TRIM39-201ENST00000376656 PIK3R6Q5UE93 754 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 LETMD1Q6P1Q0 360 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 AKAP14Q86UN6 197 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 LRRC49Q8IUZ0 686 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 LYSMD2Q8IV50 215 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 CLIP4Q8N3C7 705 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 PAAF1Q9BRP4 392 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 C1QTNF3Q9BXJ4 246 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 TAS2R13Q9NYV9 303 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 PLXNB2O15031 1838 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 OTOFQ9HC10 1997 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 CXCR6O00574 342 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 MT-ND2P03891 347 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 CDC20Q12834 499 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 SIM2Q14190 667 aaPredicted RBP16.25■□□□□ 0.19
TRIM39-201ENST00000376656 LAPTM4AQ15012 233 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 PCBP1Q15365 356 aaKnown RBP eCLIP16.25■□□□□ 0.19
TRIM39-201ENST00000376656 IL27RAQ6UWB1 636 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 ADHFE1Q8IWW8 467 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 AADATQ8N5Z0 425 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 OR6J1Q8NGC5 347 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 GIPC2Q8TF65 315 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 CAPSLQ8WWF8 208 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 REXO5Q96IC2 774 aaKnown RBP16.25■□□□□ 0.19
TRIM39-201ENST00000376656 HOXD1Q9GZZ0 328 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.25■□□□□ 0.19
TRIM39-201ENST00000376656 M0QX08 132 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 E2F3O00716 465 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 GRK3P35626 688 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 SEPHS1P49903 392 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 SLC35A2P78381 396 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 CDC42EP1Q00587 391 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 CYP4F3Q08477 520 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 NR6A1Q15406 480 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 ZNF792Q3KQV3 632 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 LRIT3Q3SXY7 679 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 SYT6Q5T7P8 510 aaPredicted RBP16.24■□□□□ 0.19
TRIM39-201ENST00000376656 BARD1Q99728 777 aaKnown RBP16.24■□□□□ 0.19
TRIM39-201ENST00000376656 VNN3Q9NY84 501 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 IFT52Q9Y366 437 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 KCNK2O95069 426 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 EIF2S1P05198 315 aaKnown RBP16.24■□□□□ 0.19
TRIM39-201ENST00000376656 PON2Q15165 354 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 RFTN2Q52LD8 501 aaPredicted RBP16.24■□□□□ 0.19
TRIM39-201ENST00000376656 LGALS12Q96DT0 336 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 TXNDC15Q96J42 360 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 DUSP21Q9H596 190 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 CPNE5Q9HCH3 593 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 LTBP3Q9NS15 1303 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 SMIM35A0A1B0GVV1 85 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 ELOVL7A1L3X0 281 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 KLK8O60259 260 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 NUAK1O60285 661 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 UPK1BO75841 260 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 SNAI1O95863 264 aaPredicted RBP16.24■□□□□ 0.19
TRIM39-201ENST00000376656 CAPN1P07384 714 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 SPNP16150 400 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 OGNP20774 298 aaKnown RBP16.24■□□□□ 0.19
TRIM39-201ENST00000376656 MLLT6P55198 1093 aaPredicted RBP16.24■□□□□ 0.19
TRIM39-201ENST00000376656 IL1RL1Q01638 556 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 KIAA0040Q15053 153 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 SMN1Q16637 294 aaKnown RBP16.24■□□□□ 0.19
TRIM39-201ENST00000376656 TYSND1Q2T9J0 566 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 ALFQ53S48 1182 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 DET1Q7L5Y6 550 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 NCLNQ969V3 563 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 TADA1Q96BN2 335 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 SEMA3CQ99985 751 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 ABCC13Q9NSE7 274 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 MIOSQ9NXC5 875 aa16.24■□□□□ 0.19
TRIM39-201ENST00000376656 A6NL46 340 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 SNPHO15079 494 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 TBX1O43435 398 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 BMPR1AP36894 532 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 NRG1Q02297 640 aaPredicted RBP16.23■□□□□ 0.19
TRIM39-201ENST00000376656 TRIP12Q14669 1992 aaPredicted RBP16.23■□□□□ 0.19
TRIM39-201ENST00000376656 PAN2Q504Q3 1202 aaKnown RBP16.23■□□□□ 0.19
TRIM39-201ENST00000376656 MOB2Q70IA6 237 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 DPP9Q86TI2 863 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 CYP4Z1Q86W10 505 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 MSRB3Q8IXL7 192 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 PHACTR4Q8IZ21 702 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 CHPFQ8IZ52 775 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 UMODL1-AS1Q8N2C9 162 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 MCFD2Q8NI22 146 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 METTL6Q8TCB7 284 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 MIR1-1HGQ9H1L0 117 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 RIBC2Q9H4K1 309 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 SP140LQ9H930 580 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 SLC25A37Q9NYZ2 338 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 CD274Q9NZQ7 290 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms