RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 ZNF599Q96NL3 588 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 BARD1Q99728 777 aaKnown RBP11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 CTRCQ99895 268 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 HGH1Q9BTY7 390 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 ACTL8Q9H568 366 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 LIMD1Q9UGP4 676 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 CPA4Q9UI42 421 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 MAGEL2Q9UJ55 1249 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 ZNF229Q9UJW7 825 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 RNF112Q9ULX5 631 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 CCDC162PA2VCL2 907 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 TTC34A8MYJ7 566 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 SLC7A4O43246 635 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 HAPLN1P10915 354 aaPredicted RBP11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 SLC2A3P11169 496 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 CYP4B1P13584 511 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 PCYT1AP49585 367 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 ZNF33AQ06730 810 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 RAPSNQ13702 412 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 GNA13Q14344 377 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 HIST2H2ACQ16777 129 aaPredicted RBP11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 SPATS1Q496A3 300 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 C6orf136Q5SQH8 315 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 ATAD3BQ5T9A4 648 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 PAGE2Q7Z2X7 111 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 ADCK1Q86TW2 530 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 CDYL2Q8N8U2 506 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 C3orf58Q8NDZ4 430 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 PPTC7Q8NI37 304 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 MCOLN3Q8TDD5 553 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 IMP4Q96G21 291 aaKnown RBP11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 TMEM209Q96SK2 561 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 FEM1AQ9BSK4 669 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 TBCDQ9BTW9 1192 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 BRINP2Q9C0B6 783 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 ABCB10Q9NRK6 738 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 VAPAQ9P0L0 249 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 LTBP3Q9NS15 1303 aa11.33□□□□□ -0.6
TM9SF2-201ENST00000376387 NPEPPSL1A6NEC2 478 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 POM121CA8CG34 1229 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 ADM5C9JUS6 153 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 PAPSS2O95340 614 aaPredicted RBP11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 G6PDP11413 515 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 KCNE1P15382 129 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 RPS12P25398 132 aaKnown RBP11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 CD40LGP29965 261 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 MASP1P48740 699 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 SEPHS1P49903 392 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 HTR6P50406 440 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 GABARAPL2P60520 117 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 CDK5R2Q13319 367 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 RBBP7Q16576 425 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 SMN1Q16637 294 aaKnown RBP11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 VARS2Q5ST30 1063 aaKnown RBP11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 Q6ZSR9 355 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 ZFAND4Q86XD8 727 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 PSD4Q8NDX1 1056 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 OR52B6Q8NGF0 335 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 DYNC2LI1Q8TCX1 351 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 ASB2Q96Q27 587 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 CYP2S1Q96SQ9 504 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 SLC25A51Q9H1U9 297 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 ELP3Q9H9T3 547 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 ARNT2Q9HBZ2 717 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 SMPD4Q9NXE4 827 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 PRKAG2Q9UGJ0 569 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 ACAD8Q9UKU7 415 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 IPPQ9Y573 584 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 FAM234BA2RU67 622 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 GNGT2O14610 69 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 PRMT5O14744 637 aaPredicted RBP11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 CD3EAPO15446 510 aaKnown RBP11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 OR4F21O95013 312 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 FTH1P02794 183 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 ALOX5P09917 674 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 IL5RAQ01344 420 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 ZNF691Q5VV52 312 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 PJA1Q8NG27 643 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 OR10A6Q8NH74 314 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 BLOC1S5Q8TDH9 187 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 RBM14Q96PK6 669 aaKnown RBP11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 PAAF1Q9BRP4 392 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 C17orf80Q9BSJ5 609 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 ITM2CQ9NQX7 267 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 FBXO8Q9NRD0 319 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 UXTQ9UBK9 157 aaPredicted RBP11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 INTS6Q9UL03 887 aaKnown RBP11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 MED16Q9Y2X0 877 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 NAALAD2Q9Y3Q0 740 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 SNPHO15079 494 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 TULP3O75386 442 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 PRKD3O94806 890 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 DARSP14868 501 aaKnown RBP11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 FMO4P31512 558 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 GGT5P36269 586 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 BMPR1AP36894 532 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 SLC26A3P40879 764 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 NRG1Q02297 640 aaPredicted RBP11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 C18orf21Q32NC0 220 aaPredicted RBP11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 MANEALQ5VSG8 457 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms