RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 SCARF2Q96GP6 870 aaPredicted RBP10.9□□□□□ -0.67
PDPN-202ENST00000376057 FBXL12Q9NXK8 326 aa10.9□□□□□ -0.67
PDPN-202ENST00000376057 ATXN10Q9UBB4 475 aa10.9□□□□□ -0.67
PDPN-202ENST00000376057 DUSP12Q9UNI6 340 aa10.9□□□□□ -0.67
PDPN-202ENST00000376057 PDE10AQ9Y233 779 aa10.9□□□□□ -0.67
PDPN-202ENST00000376057 COQ6Q9Y2Z9 468 aa10.9□□□□□ -0.67
PDPN-202ENST00000376057 DIAPH2O60879 1101 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 SIX3O95343 332 aaPredicted RBP10.89□□□□□ -0.67
PDPN-202ENST00000376057 OTCP00480 354 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 PCSK2P16519 638 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 PTPN4P29074 926 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 SLC6A12P48065 614 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 CTSCP53634 463 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 ADPRHP54922 357 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 CDK3Q00526 305 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 ZNF33BQ06732 778 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 DMPKQ09013 629 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 LSM12Q3MHD2 195 aaKnown RBP10.89□□□□□ -0.67
PDPN-202ENST00000376057 XKR5Q6UX68 686 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 HORMAD1Q86X24 394 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 HM13Q8TCT9 377 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 MCOLN3Q8TDD5 553 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 SLC7A6OSQ96CW6 309 aaPredicted RBP10.89□□□□□ -0.67
PDPN-202ENST00000376057 TMEM79Q9BSE2 394 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 HGH1Q9BTY7 390 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 ZBTB26Q9HCK0 441 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 SERGEFQ9UGK8 458 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 TAGLN3Q9UI15 199 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 REV3LO60673 3130 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 RANBP2P49792 3224 aaKnown RBP10.89□□□□□ -0.67
PDPN-202ENST00000376057 A0A1W2PP55 124 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 K7ESM1 405 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 ITGB6P18564 788 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 RPIAP49247 311 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 MLLT1Q03111 559 aaPredicted RBP10.89□□□□□ -0.67
PDPN-202ENST00000376057 SF3A3Q12874 501 aaKnown RBP eCLIP10.89□□□□□ -0.67
PDPN-202ENST00000376057 GRIK2Q13002 908 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 PHKG1Q16816 387 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 GGTA1PQ4G0N0 100 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 UBE2R2Q712K3 238 aaPredicted RBP10.89□□□□□ -0.67
PDPN-202ENST00000376057 LARP4Q71RC2 724 aaKnown RBP eCLIP10.89□□□□□ -0.67
PDPN-202ENST00000376057 C11orf96Q7Z7L8 435 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 SPNS2Q8IVW8 549 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 ATL1Q8WXF7 558 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 TMEM159Q96B96 161 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 CDX2Q99626 313 aaPredicted RBP10.89□□□□□ -0.67
PDPN-202ENST00000376057 SGK2Q9HBY8 427 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 TNFRSF12AQ9NP84 129 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 MID1IP1Q9NPA3 183 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 DNAJC15Q9Y5T4 150 aa10.89□□□□□ -0.67
PDPN-202ENST00000376057 MGAT4DA6NG13 374 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 K7EPI3 171 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 RNASEH2AO75792 299 aaKnown RBP10.88□□□□□ -0.67
PDPN-202ENST00000376057 WDR47O94967 919 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 HIST1H2AGP0C0S8 130 aaPredicted RBP10.88□□□□□ -0.67
PDPN-202ENST00000376057 PRR35P0CG20 571 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 HIST1H2ADP20671 130 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 WASP42768 502 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 GTF2H2Q13888 395 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 OGFOD2Q6N063 350 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 GTF2H2CQ6P1K8 395 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 UNC5DQ6UXZ4 953 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 GPRIN3Q6ZVF9 776 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 DET1Q7L5Y6 550 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 GOLGA7Q7Z5G4 137 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 MOCOSQ96EN8 888 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 HIST1H2AHQ96KK5 128 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 CCDC138Q96M89 665 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 OR52B2Q96RD2 323 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 HIST1H2AJQ99878 128 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 H2AFJQ9BTM1 129 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 SLC32A1Q9H598 525 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 ARL8BQ9NVJ2 186 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 GULP1Q9UBP9 304 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 TRPS1Q9UHF7 1281 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 OR7A17O14581 309 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 UGDHO60701 494 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 KATNA1O75449 491 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 EBLN1P0CF75 366 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 MYCLP1P12525 358 aaPredicted RBP10.88□□□□□ -0.67
PDPN-202ENST00000376057 AGTR2P50052 363 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 HSPA14Q0VDF9 509 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 NAA25Q14CX7 972 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 MLF2Q15773 248 aaPredicted RBP10.88□□□□□ -0.67
PDPN-202ENST00000376057 XKR7Q5GH72 579 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 VWA5B1Q5TIE3 1220 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 SYVN1Q86TM6 617 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 VRK3Q8IV63 474 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 ZNF547Q8IVP9 402 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 TRPC4APQ8TEL6 797 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 CMTM5Q96DZ9 223 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 SIPA1Q96FS4 1042 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 MRGPRX1Q96LB2 322 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 NSUN5Q96P11 429 aaKnown RBP10.88□□□□□ -0.67
PDPN-202ENST00000376057 SLC17A9Q9BYT1 436 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 SLC29A3Q9BZD2 475 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 NUF2Q9BZD4 464 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 MMADHCQ9H3L0 296 aaPredicted RBP10.88□□□□□ -0.67
PDPN-202ENST00000376057 ITM2CQ9NQX7 267 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 USP36Q9P275 1121 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms