RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 KAT7O95251 611 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 RAB3DO95716 219 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ZNF10P21506 573 aaPredicted RBP6.53□□□□□ -1.36
UBR4-204ENST00000375254 ELOAQ14241 798 aaKnown RBP6.53□□□□□ -1.36
UBR4-204ENST00000375254 KRBOX4Q5JUW0 171 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ZBTB33Q86T24 672 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 BEST3Q8N1M1 668 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 SDR42E1Q8WUS8 393 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 VPS25Q9BRG1 176 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 TAS2R10Q9NYW0 307 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ACEP12821 1306 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CCNB2O95067 398 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CKMT1AP12532 417 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 DARSP14868 501 aaKnown RBP6.53□□□□□ -1.36
UBR4-204ENST00000375254 CDK10Q15131 360 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 DCST1Q5T197 706 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 PSTKQ8IV42 348 aaKnown RBP6.53□□□□□ -1.36
UBR4-204ENST00000375254 ZNF34Q8IZ26 560 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 FKBP10Q96AY3 582 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 MOAP1Q96BY2 351 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ZNF649Q9BS31 505 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 FKTNO75072 461 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ERVK-10P10266 1014 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 NOS2P35228 1153 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 VAMP2P63027 116 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 GNMTQ14749 295 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 RFWD3Q6PCD5 774 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ASB13Q8WXK3 278 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 SLC7A5P2Q9GIP4 190 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CSADQ9Y600 493 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CFTRP13569 1480 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 FAM205AQ6ZU69 1335 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 BEST1O76090 585 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 TPH1P17752 444 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 EPHA3P29320 983 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 LAPTM5Q13571 262 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 RAB39AQ14964 217 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 FRS2Q8WU20 508 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 PNMA5Q96PV4 448 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 GTF2A1LQ9UNN4 478 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CRADDP78560 199 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ABLIM2Q6H8Q1 611 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 HACD2Q6Y1H2 254 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 MFSD6LQ8IWD5 586 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ABHD11Q8NFV4 315 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 TNFRSF25Q93038 417 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 RNF121Q9H920 327 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CEPT1Q9Y6K0 416 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CDH10Q9Y6N8 788 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 JUPP14923 745 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CD44P16070 742 aaKnown RBP6.53□□□□□ -1.36
UBR4-204ENST00000375254 UBXN2BQ14CS0 331 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 KIAA1614Q5VZ46 1190 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 FUZQ9BT04 418 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 NDRG3Q9UGV2 375 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 PPIEQ9UNP9 301 aaKnown RBP6.53□□□□□ -1.36
UBR4-204ENST00000375254 PCDHGA8Q9Y5G5 932 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 IFT140Q96RY7 1462 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 UPP2O95045 317 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CTPS1P17812 591 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 GKP32189 559 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 DCAF6Q58WW2 860 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CPTPQ5TA50 214 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 COPS5Q92905 334 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 MARC2Q969Z3 335 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ALPK1Q96QP1 1244 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 TMEM47Q9BQJ4 181 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ATP13A1Q9HD20 1204 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 AATKQ6ZMQ8 1374 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CASC3O15234 703 aaKnown RBP6.53□□□□□ -1.36
UBR4-204ENST00000375254 AKAP3O75969 853 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CYP2A7P20853 494 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 DLX5P56178 289 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 MFSD14BQ5SR56 506 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CYS1Q717R9 158 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 TCEANCQ8N8B7 351 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 GMCL1P1Q8NEA9 526 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 OR6Q1Q8NGQ2 317 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 PMEPA1Q969W9 287 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 SLITRK1Q96PX8 696 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 GJB4Q9NTQ9 266 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 HTRA2O43464 458 aaPredicted RBP6.53□□□□□ -1.36
UBR4-204ENST00000375254 TARDBPQ13148 414 aaKnown RBP eCLIP6.53□□□□□ -1.362e-7■■■■□ 19.5
UBR4-204ENST00000375254 IQCHQ86VS3 1027 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 POC1BQ8TC44 478 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 NCSTNQ92542 709 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 RIPOR3Q96MK2 946 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 FAM49AQ9H0Q0 323 aaPredicted RBP6.53□□□□□ -1.36
UBR4-204ENST00000375254 TMEM248Q9NWD8 314 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 RIMKLBQ9ULI2 386 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 BDNFP23560 247 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CDK8P49336 464 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ARHGEF7Q14155 803 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 UGT3A2Q3SY77 523 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 C1QTNF12Q5T7M4 302 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 DNM1P34Q6PK57 102 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ZNF730Q6ZMV8 503 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 MARK4Q96L34 752 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 MRPL22Q9NWU5 206 aaKnown RBP6.53□□□□□ -1.36
UBR4-204ENST00000375254 PCDHB3Q9Y5E6 796 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms