RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 MFSD2AQ8NA29 543 aa17.19■□□□□ 0.34
PFDN6-201ENST00000374606 LINC00615Q96LM1 132 aaPredicted RBP17.19■□□□□ 0.34
PFDN6-201ENST00000374606 SLC30A3Q99726 388 aa17.19■□□□□ 0.34
PFDN6-201ENST00000374606 SELENOSQ9BQE4 189 aa17.19■□□□□ 0.34
PFDN6-201ENST00000374606 SLC13A1Q9BZW2 595 aa17.19■□□□□ 0.34
PFDN6-201ENST00000374606 CAPN10Q9HC96 672 aa17.19■□□□□ 0.34
PFDN6-201ENST00000374606 FSCN3Q9NQT6 498 aa17.19■□□□□ 0.34
PFDN6-201ENST00000374606 LATS2Q9NRM7 1088 aa17.19■□□□□ 0.34
PFDN6-201ENST00000374606 KLHL42Q9P2K6 505 aa17.19■□□□□ 0.34
PFDN6-201ENST00000374606 FAM8A1Q9UBU6 413 aa17.19■□□□□ 0.34
PFDN6-201ENST00000374606 LRP4O75096 1905 aa17.19■□□□□ 0.34
PFDN6-201ENST00000374606 TNFRSF10CO14798 259 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 GSTA1P08263 222 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 LTA4HP09960 611 aaKnown RBP17.18■□□□□ 0.34
PFDN6-201ENST00000374606 CCDC166P0CW27 439 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 COL6A2P12110 1019 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 AOAHP28039 575 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 OAS2P29728 719 aaKnown RBP17.18■□□□□ 0.34
PFDN6-201ENST00000374606 CCR7P32248 378 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 GMPRP36959 345 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 GNPDA1P46926 289 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 CCT5P48643 541 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 RGS4P49798 205 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 KPNA2P52292 529 aaKnown RBP17.18■□□□□ 0.34
PFDN6-201ENST00000374606 OVGP1Q12889 678 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 CSHL1Q14406 222 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 INSCQ1MX18 579 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 TSNAXIP1Q2TAA8 658 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 TMEM207Q6UWW9 146 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 CLEC14AQ86T13 490 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 DCP2Q8IU60 420 aaKnown RBP17.18■□□□□ 0.34
PFDN6-201ENST00000374606 OXR1Q8N573 874 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 NKAPQ8N5F7 415 aaKnown RBP17.18■□□□□ 0.34
PFDN6-201ENST00000374606 HM13Q8TCT9 377 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 KCTD4Q8WVF5 259 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 LINGO1Q96FE5 620 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 PDXPQ96GD0 296 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 OR2M4Q96R27 311 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 CARS2Q9HA77 564 aaKnown RBP17.18■□□□□ 0.34
PFDN6-201ENST00000374606 CYP4F12Q9HCS2 524 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 KCNK9Q9NPC2 374 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 MRPL40Q9NQ50 206 aaKnown RBP17.18■□□□□ 0.34
PFDN6-201ENST00000374606 DCDC2Q9UHG0 476 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 ZNHIT2Q9UHR6 403 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 SUFUQ9UMX1 484 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 PRKAB1Q9Y478 270 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 GPSM3Q9Y4H4 160 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 PCYT1BQ9Y5K3 369 aaPredicted RBP17.18■□□□□ 0.34
PFDN6-201ENST00000374606 ITPR1Q14643 2758 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 NBEAQ8NFP9 2946 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 PCDH15Q96QU1 1955 aa17.18■□□□□ 0.34
PFDN6-201ENST00000374606 A0A1W2PR77 199 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 KLHL33A6NCF5 533 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 MGAT4DA6NG13 374 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 LIN7AO14910 233 aaPredicted RBP17.17■□□□□ 0.34
PFDN6-201ENST00000374606 PRPF4O43172 522 aaKnown RBP eCLIP17.17■□□□□ 0.347e-8■■■□□ 14.7
PFDN6-201ENST00000374606 POP7O75817 140 aaKnown RBP17.17■□□□□ 0.34
PFDN6-201ENST00000374606 KLHL2O95198 593 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 CAPNS1P04632 268 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 VCLP18206 1134 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 NR1D1P20393 614 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 DGKAP23743 735 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 IL2P60568 153 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 PPP2R2AP63151 447 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 HSPA14Q0VDF9 509 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 FAM83EQ2M2I3 478 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 PYCR3Q53H96 274 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 PLEKHS1Q5SXH7 462 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 LRRC8EQ6NSJ5 796 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 KLC3Q6P597 504 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 C19orf48Q6RUI8 117 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 LAYNQ6UX15 382 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 NAPRTQ6XQN6 538 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 PDZD3Q86UT5 571 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 AMZ2Q86W34 360 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 SPNS2Q8IVW8 549 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 CENPLQ8N0S6 344 aaPredicted RBP17.17■□□□□ 0.34
PFDN6-201ENST00000374606 MINDY1Q8N5J2 469 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 OR2L2Q8NH16 312 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 C1orf216Q8TAB5 229 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 ANKRD49Q8WVL7 239 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 ASZ1Q8WWH4 475 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 OR1E3Q8WZA6 343 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 GLMNQ92990 594 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 SCARF2Q96GP6 870 aaPredicted RBP17.17■□□□□ 0.34
PFDN6-201ENST00000374606 TIMM29Q9BSF4 260 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 DNMT3AQ9Y6K1 912 aaPredicted RBP17.17■□□□□ 0.34
PFDN6-201ENST00000374606 FREM2Q5SZK8 3169 aa17.17■□□□□ 0.34
PFDN6-201ENST00000374606 SPTY2D1-AS1A0A0U1RR47 76 aa17.16■□□□□ 0.34
PFDN6-201ENST00000374606 C17orf113A0A1B0GUU1 675 aa17.16■□□□□ 0.34
PFDN6-201ENST00000374606 TMEM120BA0PK00 339 aa17.16■□□□□ 0.34
PFDN6-201ENST00000374606 EIF3FO00303 357 aaPredicted RBP17.16■□□□□ 0.34
PFDN6-201ENST00000374606 BCAT2O15382 392 aaPredicted RBP17.16■□□□□ 0.34
PFDN6-201ENST00000374606 TYROBPO43914 113 aa17.16■□□□□ 0.34
PFDN6-201ENST00000374606 WNT1P04628 370 aa17.16■□□□□ 0.34
PFDN6-201ENST00000374606 SYPP08247 313 aa17.16■□□□□ 0.34
PFDN6-201ENST00000374606 CBSLP0DN79 551 aa17.16■□□□□ 0.34
PFDN6-201ENST00000374606 ACP5P13686 325 aa17.16■□□□□ 0.34
PFDN6-201ENST00000374606 ENO3P13929 434 aaPredicted RBP17.16■□□□□ 0.34
PFDN6-201ENST00000374606 GNSP15586 552 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms