RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 GALNT4Q8N4A0 578 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 ZBTB2Q8N680 514 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 TSPEARQ8WU66 669 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 LRRC58Q96CX6 371 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 GPATCH1Q9BRR8 931 aaKnown RBP11.89□□□□□ -0.51
HMGCL-202ENST00000374487 C1orf50Q9BV19 199 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 LATS2Q9NRM7 1088 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 AIG1Q9NVV5 245 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 ANGPTL3Q9Y5C1 460 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 PRSS21Q9Y6M0 314 aa11.89□□□□□ -0.51
HMGCL-202ENST00000374487 A0A1W2PP18 115 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 NPIPB15A6NHN6 443 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-202ENST00000374487 CCDC154A6NI56 674 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 OTCP00480 354 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 SLC7A1P30825 629 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 CA5AP35218 305 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 CASP2P42575 452 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 NFYCQ13952 458 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 COQ5Q5HYK3 327 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 C6orf136Q5SQH8 315 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 C6orf10Q5SRN2 563 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 LETMD1Q6P1Q0 360 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 ZSWIM9Q86XI8 627 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 ST13P4Q8IZP2 240 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-202ENST00000374487 CBARPQ8N350 705 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-202ENST00000374487 OR2T11Q8NH01 316 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 PIP4K2CQ8TBX8 421 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 VPS33AQ96AX1 596 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 PPWD1Q96BP3 646 aaKnown RBP11.88□□□□□ -0.51
HMGCL-202ENST00000374487 GBP5Q96PP8 586 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 PLA2G2FQ9BZM2 168 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 TRIM15Q9C019 465 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 IPPKQ9H8X2 491 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 KCNK12Q9HB15 430 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 SNX13Q9Y5W8 968 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 TRBV5-4A0A0C4DH59 114 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 NME4O00746 187 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 CHRM1P11229 460 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-202ENST00000374487 HLA-FP30511 346 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 GRIA3P42263 894 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 HSPA7P48741 367 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 POLR2JP52435 117 aaKnown RBP11.88□□□□□ -0.51
HMGCL-202ENST00000374487 UFM1P61960 85 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 RCAN2Q14206 197 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 TTLL9Q3SXZ7 439 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 IER5LQ5T953 404 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 RNF220Q5VTB9 566 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 LRRC66Q68CR7 880 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 CRTC1Q6UUV9 634 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 TPRG1Q6ZUI0 275 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 MILR1Q7Z6M3 343 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 SLC15A3Q8IY34 581 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 NXPE1Q8N323 547 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 GPR26Q8NDV2 337 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 OR4F6Q8NGB9 312 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 LKAAEAR1Q8TD35 194 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 SCRN2Q96FV2 425 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 KXD1Q9BQD3 176 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 BRINP2Q9C0B6 783 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 YIPF3Q9GZM5 350 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 SEMA6AQ9H2E6 1030 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 SUV39H2Q9H5I1 410 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 ZDHHC6Q9H6R6 413 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 ZMYM5Q9UJ78 669 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 SLC25A13Q9UJS0 675 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 RAB26Q9ULW5 256 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 OARD1Q9Y530 152 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 CUL9Q8IWT3 2517 aa11.88□□□□□ -0.51
HMGCL-202ENST00000374487 TCRBV3S1A0A5B6 114 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 HMOX2P30519 316 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 VIPR2P41587 438 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 NSG1P42857 185 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 HSPA13P48723 471 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 PTPN5P54829 565 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 FOXM1Q08050 763 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 GPRC6AQ5T6X5 926 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 C22orf39Q6P5X5 142 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 FBXL19Q6PCT2 694 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 MACC1Q6ZN28 852 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 TMEM102Q8N9M5 508 aaPredicted RBP11.87□□□□□ -0.51
HMGCL-202ENST00000374487 PDPRQ8NCN5 879 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 OR2T34Q8NGX1 318 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 OR2T3Q8NH03 318 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 DNAJB14Q8TBM8 379 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 LRTOMTQ8WZ04 291 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 ISG20Q96AZ6 181 aaKnown RBP11.87□□□□□ -0.51
HMGCL-202ENST00000374487 SLC45A3Q96JT2 553 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 TEX37Q96LM6 180 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 HBEGFQ99075 208 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 C11orf16Q9NQ32 467 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 WWOXQ9NZC7 414 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 ABCD2Q9UBJ2 740 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 PTBP2Q9UKA9 531 aaKnown RBP11.87□□□□□ -0.51
HMGCL-202ENST00000374487 CDH7Q9ULB5 785 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 SUFUQ9UMX1 484 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 CCL26Q9Y258 94 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 HS3ST2Q9Y278 367 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 MYO10Q9HD67 2058 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 DOCK8Q8NF50 2099 aa11.87□□□□□ -0.51
HMGCL-202ENST00000374487 COL4A3Q01955 1670 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms