RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 DNAJB12Q9NXW2 375 aaKnown RBP11.84□□□□□ -0.51
HDAC8-204ENST00000373560 APEX2Q9UBZ4 518 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 HS3ST3B1Q9Y662 390 aa11.84□□□□□ -0.51
HDAC8-204ENST00000373560 A0A1W2PQ67 120 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 E7EQ34 232 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 FGF10O15520 208 aaPredicted RBP11.83□□□□□ -0.52
HDAC8-204ENST00000373560 CCP110O43303 1012 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 UNGP13051 313 aaPredicted RBP11.83□□□□□ -0.52
HDAC8-204ENST00000373560 ITGAXP20702 1163 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 RFC1P35251 1148 aaPredicted RBP11.83□□□□□ -0.52
HDAC8-204ENST00000373560 PREPP48147 710 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 SPINT3P49223 89 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 CASP6P55212 293 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 TMPRSS15P98073 1019 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 RBPJQ06330 500 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 RFTN1Q14699 578 aaPredicted RBP11.83□□□□□ -0.52
HDAC8-204ENST00000373560 DEFB110Q30KQ9 67 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 ZNF658Q5TYW1 1059 aaPredicted RBP11.83□□□□□ -0.52
HDAC8-204ENST00000373560 ALS2CLQ60I27 953 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 TTI2Q6NXR4 508 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 SCYL2Q6P3W7 929 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 KIRREL2Q6UWL6 708 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 WASH2PQ6VEQ5 465 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 SHISA6Q6ZSJ9 500 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 LRRTM4Q86VH4 590 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 CA5BP1Q8WTZ4 195 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 EID2BQ96D98 161 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 ITPKCQ96DU7 683 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 DMRTA2Q96SC8 542 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 DPH2Q9BQC3 489 aaPredicted RBP11.83□□□□□ -0.52
HDAC8-204ENST00000373560 UCK2Q9BZX2 261 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 ZFAND3Q9H8U3 227 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 GPAMQ9HCL2 828 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 LRFN1Q9P244 771 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 IFT80Q9P2H3 777 aaPredicted RBP11.83□□□□□ -0.52
HDAC8-204ENST00000373560 NDOR1Q9UHB4 597 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 GPN3Q9UHW5 284 aaPredicted RBP11.83□□□□□ -0.52
HDAC8-204ENST00000373560 RCOR1Q9UKL0 485 aa11.83□□□□□ -0.52
HDAC8-204ENST00000373560 TRAV17A0A0B4J275 112 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 FAM237AA0A1B0GTK4 181 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 FAM90A27PA6NNH2 459 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 INAFM1C9JVW0 142 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 KMOO15229 486 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 PRAMEF2O60811 474 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 RASAL1O95294 804 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 MMEP08473 750 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 CYP11B1P15538 503 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 ZNF30P17039 623 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 POLR2CP19387 275 aaPredicted RBP11.82□□□□□ -0.52
HDAC8-204ENST00000373560 CDH3P22223 829 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 UGT1A4P22310 534 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 MMP11P24347 488 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 SOX11P35716 441 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 HSF1Q00613 529 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 ADCY2Q08462 1091 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 GTF3C1Q12789 2109 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 CDHR3Q6ZTQ4 885 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 NOP9Q86U38 636 aaKnown RBP11.82□□□□□ -0.52
HDAC8-204ENST00000373560 OOSP2Q86WS3 158 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 CHERPQ8IWX8 916 aaKnown RBP11.82□□□□□ -0.52
HDAC8-204ENST00000373560 AGAP11Q8TF27 550 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 MAGED4Q96JG8 741 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 SPRTNQ9H040 489 aaPredicted RBP11.82□□□□□ -0.52
HDAC8-204ENST00000373560 PDCL3Q9H2J4 239 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 ZFYVE1Q9HBF4 777 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 CDC23Q9UJX2 597 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 POMT2Q9UKY4 750 aa11.82□□□□□ -0.52
HDAC8-204ENST00000373560 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.82□□□□□ -0.52
HDAC8-204ENST00000373560 C17orf113A0A1B0GUU1 675 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 ZWINTO95229 277 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 PRLP01236 227 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 CELA2AP08217 269 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 IDSP22304 550 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 RENBPP51606 427 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 MYBPHQ13203 477 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 PKP1Q13835 747 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 PCOLCEQ15113 449 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 ISM2Q6H9L7 571 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 SPPL2CQ8IUH8 684 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 FAM71AQ8IYT1 594 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 CIARTQ8N365 385 aaPredicted RBP11.81□□□□□ -0.52
HDAC8-204ENST00000373560 MARVELD2Q8N4S9 558 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.81□□□□□ -0.52
HDAC8-204ENST00000373560 PSMF1Q92530 271 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 LMF1Q96S06 567 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 C11orf70Q9BRQ4 267 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 GPATCH1Q9BRR8 931 aaKnown RBP11.81□□□□□ -0.52
HDAC8-204ENST00000373560 FAM83DQ9H4H8 585 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 TRIM39Q9HCM9 518 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 FAM60AQ9NP50 221 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 PTGFRNQ9P2B2 879 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 TMPRSS11EQ9UL52 423 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 CHKBQ9Y259 395 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 FHOD1Q9Y613 1164 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 ZANQ9Y493 2812 aa11.81□□□□□ -0.52
HDAC8-204ENST00000373560 TLN2Q9Y4G6 2542 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 SLC25A14O95258 325 aaPredicted RBP11.8□□□□□ -0.52
HDAC8-204ENST00000373560 F13A1P00488 732 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 ERCC2P18074 760 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 MSX1P28360 303 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms