RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 NFKB1P19838 968 aa11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 TACR2P21452 398 aa11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 GSK3BP49841 420 aa11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 MAXP61244 160 aa11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 ADARB1P78563 741 aaKnown RBP11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 DDX39BQ13838 428 aaKnown RBP11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 RAB44Q7Z6P3 723 aaPredicted RBP11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 ARMC8Q8IUR7 673 aa11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 TBC1D21Q8IYX1 336 aa11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 OSCP1Q8WVF1 389 aa11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 ZNF486Q96H40 463 aaPredicted RBP11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 C3orf30Q96M34 536 aa11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 KLHL5Q96PQ7 755 aa11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 SLC30A3Q99726 388 aa11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 CLSTN3Q9BQT9 956 aa11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 FICDQ9BVA6 458 aa11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 DDX28Q9NUL7 540 aaKnown RBP11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 PNMA8BQ9ULN7 279 aaPredicted RBP11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 USP22Q9UPT9 525 aa11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 PDE10AQ9Y233 779 aa11.03□□□□□ -0.64
RPRD1B-201ENST00000373433 ILVBLA1L0T0 632 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 MFN2O95140 757 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 C7P10643 843 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 THRBP10828 461 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 SLC6A2P23975 617 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 CRHBPP24387 322 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 PTPN3P26045 913 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 GSTM2P28161 218 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 KPNA2P52292 529 aaKnown RBP11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 ST8SIA6P61647 398 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 DGUOKQ16854 277 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 PYCR3Q53H96 274 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 UBE2UQ5VVX9 321 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 USP43Q70EL4 1123 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 PAGE2Q7Z2X7 111 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 CCDC103Q8IW40 242 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 PPHLN1Q8NEY8 458 aaKnown RBP11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 SLC22A17Q8WUG5 538 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 SH3KBP1Q96B97 665 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 C19orf60Q96EN9 201 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 TMEM74Q96NL1 305 aa11.02□□□□□ -0.64
RPRD1B-201ENST00000373433 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.02□□□□□ -0.641e-6■■□□□ 12.1
RPRD1B-201ENST00000373433 NUP205Q92621 2012 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 TET1Q8NFU7 2136 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 GRXCR1A8MXD5 290 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 FAM72CH0Y354 149 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 H3BMM5 538 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 SNX2O60749 519 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 JUNBP17275 347 aaPredicted RBP11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 MLLT6P55198 1093 aaPredicted RBP11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 RHOAP61586 193 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 IFITM2Q01629 132 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 PPP1R8Q12972 351 aaKnown RBP11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 FAM72AQ5TYM5 149 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 PM20D1Q6GTS8 502 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 FAM72DQ6L9T8 149 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 RETSATQ6NUM9 610 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 TRAF7Q6Q0C0 670 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 FAM72BQ86X60 149 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 PNPLA1Q8N8W4 532 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 LILRB4Q8NHJ6 448 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 VPS33AQ96AX1 596 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 TUBGCP3Q96CW5 907 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 LRRC58Q96CX6 371 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 PPP1R2P1Q96PQ5 205 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 TRPV5Q9NQA5 729 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 ITM2CQ9NQX7 267 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 DKK3Q9UBP4 350 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 ENPP5Q9UJA9 477 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 PCDHB3Q9Y5E6 796 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 CNOT1A5YKK6 2376 aaKnown RBP11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 A8MT66 165 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 TBX1O43435 398 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 NDUFS2O75306 463 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 IPO13O94829 963 aaKnown RBP11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 KRT8P05787 483 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 PTPN2P17706 415 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 AGXTP21549 392 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 ARSFP54793 590 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 RPS24P62847 133 aaKnown RBP11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 LIPEQ05469 1076 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 COL9A2Q14055 689 aaPredicted RBP11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 UGP2Q16851 508 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 ZNF470Q6ECI4 717 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 PRMT9Q6P2P2 845 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 SLC16A12Q6ZSM3 486 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 USP51Q70EK9 711 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 MIER2Q8N344 545 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 MYOCQ99972 504 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 AKTIPQ9H8T0 292 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 NEK6Q9HC98 313 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 TMEM30AQ9NV96 361 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 TBC1D14Q9P2M4 693 aa11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 UBA2Q9UBT2 640 aaPredicted RBP11.02□□□□□ -0.65
RPRD1B-201ENST00000373433 ZNF197O14709 1029 aa11.01□□□□□ -0.65
RPRD1B-201ENST00000373433 INPPL1O15357 1258 aa11.01□□□□□ -0.65
RPRD1B-201ENST00000373433 IDH3BO43837 385 aa11.01□□□□□ -0.65
RPRD1B-201ENST00000373433 NOBOXO60393 691 aa11.01□□□□□ -0.65
RPRD1B-201ENST00000373433 C1RP00736 705 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms