RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 PLEKHM1Q9Y4G2 1056 aa15.52■□□□□ 0.07
TMEM53-204ENST00000372243 SNX11Q9Y5W9 270 aa15.52■□□□□ 0.07
TMEM53-204ENST00000372243 USP34Q70CQ2 3546 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 ZFC3H1O60293 1989 aaKnown RBP15.51■□□□□ 0.07
TMEM53-204ENST00000372243 MATN4O95460 622 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 CTSEP14091 401 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 PDHA2P29803 388 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 PREPP48147 710 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 RXRGP48443 463 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 ELOCQ15369 112 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 ZNF542PQ5EBM4 170 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 NRROSQ86YC3 692 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 FSTL5Q8N475 847 aaPredicted RBP15.51■□□□□ 0.07
TMEM53-204ENST00000372243 RHEBL1Q8TAI7 183 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 ELF4Q99607 663 aaPredicted RBP15.51■□□□□ 0.07
TMEM53-204ENST00000372243 LRRC61Q9BV99 259 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 ZDHHC5Q9C0B5 715 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 IQCGQ9H095 443 aaKnown RBP15.51■□□□□ 0.07
TMEM53-204ENST00000372243 TCEAL2Q9H3H9 227 aaPredicted RBP15.51■□□□□ 0.07
TMEM53-204ENST00000372243 TFB2MQ9H5Q4 396 aaKnown RBP15.51■□□□□ 0.07
TMEM53-204ENST00000372243 SPASTQ9UBP0 616 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 FAM8A1Q9UBU6 413 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 KCNK6Q9Y257 313 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 CACNA1EQ15878 2313 aa15.51■□□□□ 0.07
TMEM53-204ENST00000372243 DFNA5O60443 496 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 RBP1P09455 135 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 GMPRP36959 345 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 LPAL2Q16609 132 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 ZNF423Q2M1K9 1284 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 LVRNQ6Q4G3 990 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 IL27RAQ6UWB1 636 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 ABRAXAS1Q6UWZ7 409 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 CDHR3Q6ZTQ4 885 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 PIWIL4Q7Z3Z4 852 aaKnown RBP15.5■□□□□ 0.07
TMEM53-204ENST00000372243 ISCA2Q86U28 154 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 PDZD3Q86UT5 571 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 RASGRP3Q8IV61 690 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 SPATA6LQ8N4H0 392 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 KIAA1191Q96A73 305 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 OSGEPL1Q9H4B0 414 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 PLLPQ9Y342 182 aa15.5■□□□□ 0.07
TMEM53-204ENST00000372243 H3BQF6 201 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 TM9SF1O15321 606 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 SLC16A5O15375 505 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 ZBTB14O43829 449 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 SPAG7O75391 227 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 TOP3BO95985 862 aaKnown RBP15.49■□□□□ 0.07
TMEM53-204ENST00000372243 CFIP05156 583 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 C8GP07360 202 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 SLC35G4P0C7Q5 338 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 AK4P27144 223 aaPredicted RBP15.49■□□□□ 0.07
TMEM53-204ENST00000372243 ACADLP28330 430 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 MPLP40238 635 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 ACTR1BP42025 376 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 ARRB1P49407 418 aaPredicted RBP15.49■□□□□ 0.07
TMEM53-204ENST00000372243 ACTR1AP61163 376 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 SP140Q13342 867 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 UAP1L1Q3KQV9 507 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 CCDC153Q494R4 210 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 TRIM61Q5EBN2 209 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 PRRT3Q5FWE3 981 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 CAPRIN2Q6IMN6 1127 aaKnown RBP15.49■□□□□ 0.07
TMEM53-204ENST00000372243 ADAMTSL2Q86TH1 951 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 SPNS2Q8IVW8 549 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 CCL4L1Q8NHW4 92 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 STAG3L4Q8TBR4 150 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 TCP10LQ8TDR4 215 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 ASB11Q8WXH4 323 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 ZNF358Q9NW07 568 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 TMEM216Q9P0N5 145 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 PI4KAP42356 2102 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 A6NCN8 305 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 GFYI3L273 518 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 IFRD1O00458 451 aaPredicted RBP15.49■□□□□ 0.07
TMEM53-204ENST00000372243 BTN3A1O00481 513 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 SCAMP1O15126 338 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 YKT6O15498 198 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 PIAS2O75928 621 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 ZWINTO95229 277 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 SYPP08247 313 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 TFEBP19484 476 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 GRIK2Q13002 908 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 TECRLQ5HYJ1 363 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 PLA2G2CQ5R387 149 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 N4BP2L1Q5TBK1 243 aaPredicted RBP15.49■□□□□ 0.07
TMEM53-204ENST00000372243 UNC5DQ6UXZ4 953 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 GKN2Q86XP6 184 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 SUMF1Q8NBK3 374 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 PTERQ96BW5 349 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 FOPNLQ96NB1 174 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 MRPL57Q9BQC6 102 aaKnown RBP15.49■□□□□ 0.07
TMEM53-204ENST00000372243 ARRDC1-AS1Q9H2J1 176 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 MRPL46Q9H2W6 279 aaKnown RBP15.49■□□□□ 0.07
TMEM53-204ENST00000372243 KCNK9Q9NPC2 374 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 FAM53CQ9NYF3 392 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 TBC1D29Q9UFV1 150 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 CSNK1G3Q9Y6M4 447 aa15.49■□□□□ 0.07
TMEM53-204ENST00000372243 PCDH15Q96QU1 1955 aa15.48■□□□□ 0.07
TMEM53-204ENST00000372243 SDK1Q7Z5N4 2213 aa15.48■□□□□ 0.07
TMEM53-204ENST00000372243 CUL9Q8IWT3 2517 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms