RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 EPG5Q9HCE0 2579 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 C1orf232A0A0U1RR37 186 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 CDC7O00311 574 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 CASQ2O14958 399 aaPredicted RBP13.85□□□□□ -0.19
LDB3-204ENST00000372066 CRCPO75575 148 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 SIX3O95343 332 aaPredicted RBP13.85□□□□□ -0.19
LDB3-204ENST00000372066 MATN4O95460 622 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 PRAMEF1O95521 474 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 ESRRBO95718 433 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 BAG2O95816 211 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 MT-CO1P00395 513 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 S100BP04271 92 aaPredicted RBP13.85□□□□□ -0.19
LDB3-204ENST00000372066 UROSP10746 265 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 LBPP18428 481 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 SPAM1P38567 509 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 CDH13P55290 713 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 MRPS35P82673 323 aaKnown RBP13.85□□□□□ -0.19
LDB3-204ENST00000372066 COQ5Q5HYK3 327 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 PITRM1Q5JRX3 1037 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 TCHHL1Q5QJ38 904 aaPredicted RBP13.85□□□□□ -0.19
LDB3-204ENST00000372066 PLA2G2CQ5R387 149 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 REP15Q6BDI9 236 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 PTRHD1Q6GMV3 140 aaKnown RBP13.85□□□□□ -0.19
LDB3-204ENST00000372066 METTL2BQ6P1Q9 378 aaKnown RBP13.85□□□□□ -0.19
LDB3-204ENST00000372066 PRMT9Q6P2P2 845 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 CYHR1Q6ZMK1 362 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 GK5Q6ZS86 529 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 RPS27LQ71UM5 84 aaKnown RBP13.85□□□□□ -0.19
LDB3-204ENST00000372066 CAMK1DQ8IU85 385 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 PCDH20Q8N6Y1 951 aaKnown RBP13.85□□□□□ -0.19
LDB3-204ENST00000372066 PAF1Q8N7H5 531 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 SIDT2Q8NBJ9 832 aaKnown RBP13.85□□□□□ -0.19
LDB3-204ENST00000372066 PCYOX1LQ8NBM8 494 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 TRPC4APQ8TEL6 797 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 LMLNQ96KR4 655 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 CPEB1Q9BZB8 566 aaKnown RBP13.85□□□□□ -0.19
LDB3-204ENST00000372066 CACNA2D2Q9NY47 1150 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 KLHL42Q9P2K6 505 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 SLC25A13Q9UJS0 675 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 PSMD13Q9UNM6 376 aa13.85□□□□□ -0.19
LDB3-204ENST00000372066 TM4SF5O14894 197 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 PIP5K1BO14986 540 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 SMAD6O43541 496 aaKnown RBP13.84□□□□□ -0.19
LDB3-204ENST00000372066 PEX1O43933 1283 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 OR1I1O60431 355 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 NRP2O60462 931 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 IDO1P14902 403 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 CTPS1P17812 591 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 DGKEP52429 567 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 THOP1P52888 689 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 PSME3P61289 254 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 NFATC2Q13469 925 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 BLMHQ13867 455 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 LRP8Q14114 963 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 FLOT2Q14254 428 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 PCBP2Q15366 365 aaKnown RBP eCLIP13.84□□□□□ -0.19
LDB3-204ENST00000372066 CDKN3Q16667 212 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 SPATS1Q496A3 300 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 C22orf39Q6P5X5 142 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 USP45Q70EL2 814 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 SERPINA9Q86WD7 417 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 APLFQ8IW19 511 aaPredicted RBP13.84□□□□□ -0.19
LDB3-204ENST00000372066 CPNE9Q8IYJ1 553 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 EZH1Q92800 747 aaPredicted RBP13.84□□□□□ -0.19
LDB3-204ENST00000372066 ECHDC3Q96DC8 303 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 SMIM14Q96QK8 99 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 ZNF382Q96SR6 550 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 DUSP15Q9H1R2 295 aaPredicted RBP13.84□□□□□ -0.19
LDB3-204ENST00000372066 AKTIPQ9H8T0 292 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 RIC8BQ9NVN3 520 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 EBF1Q9UH73 591 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 INVSQ9Y283 1065 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 NDUFAF1Q9Y375 327 aa13.84□□□□□ -0.19
LDB3-204ENST00000372066 GLYATL1P3A0A0U1RQE8 302 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 K7ERQ8 282 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 EIF3FO00303 357 aaPredicted RBP13.83□□□□□ -0.19
LDB3-204ENST00000372066 GAPDHSO14556 408 aaPredicted RBP13.83□□□□□ -0.19
LDB3-204ENST00000372066 MRASO14807 208 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 RAD51BO15315 384 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 BCAS2O75934 225 aaPredicted RBP13.83□□□□□ -0.19
LDB3-204ENST00000372066 NFATC1O95644 943 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 ALPIP09923 528 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 PRR35P0CG20 571 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 SRCP12931 536 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 TCF3P15923 654 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 GPX3P22352 226 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 DGKAP23743 735 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 ACRV1P26436 265 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 CD70P32970 193 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 CREB5Q02930 508 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 KLC1Q07866 573 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 TRAP1Q12931 704 aaKnown RBP13.83□□□□□ -0.19
LDB3-204ENST00000372066 PPP1R3AQ16821 1122 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 TTLL9Q3SXZ7 439 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 MACC1Q6ZN28 852 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 TPGS1Q6ZTW0 290 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 FRA10AC1Q70Z53 315 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 PHYKPLQ8IUZ5 450 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 PLPP6Q8IY26 295 aa13.83□□□□□ -0.19
LDB3-204ENST00000372066 MYO1HQ8N1T3 1032 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms