RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 KCTD19Q17RG1 926 aaPredicted RBP14.82□□□□□ -0.04
RPF1-202ENST00000370656 SPNS2Q8IVW8 549 aa14.82□□□□□ -0.04
RPF1-202ENST00000370656 APLFQ8IW19 511 aaPredicted RBP14.82□□□□□ -0.04
RPF1-202ENST00000370656 TRIM48Q8IWZ4 208 aa14.82□□□□□ -0.04
RPF1-202ENST00000370656 MCUQ8NE86 351 aa14.82□□□□□ -0.04
RPF1-202ENST00000370656 CPT1CQ8TCG5 803 aa14.82□□□□□ -0.04
RPF1-202ENST00000370656 MAML1Q92585 1016 aa14.82□□□□□ -0.04
RPF1-202ENST00000370656 PKNOX2Q96KN3 472 aa14.82□□□□□ -0.04
RPF1-202ENST00000370656 POLR1EQ9GZS1 481 aaKnown RBP14.82□□□□□ -0.04
RPF1-202ENST00000370656 UCK1Q9HA47 277 aa14.82□□□□□ -0.04
RPF1-202ENST00000370656 NT5MQ9NPB1 228 aa14.82□□□□□ -0.04
RPF1-202ENST00000370656 LNPEPQ9UIQ6 1025 aa14.82□□□□□ -0.04
RPF1-202ENST00000370656 TRHDEQ9UKU6 1024 aa14.82□□□□□ -0.04
RPF1-202ENST00000370656 PADI1Q9ULC6 663 aa14.82□□□□□ -0.04
RPF1-202ENST00000370656 PCDHGA6Q9Y5G7 932 aa14.82□□□□□ -0.04
RPF1-202ENST00000370656 OAS3Q9Y6K5 1087 aaKnown RBP14.82□□□□□ -0.04
RPF1-202ENST00000370656 TNRC6AQ8NDV7 1962 aaKnown RBP14.82□□□□□ -0.04
RPF1-202ENST00000370656 A6NCN8 305 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 E7ESA3 106 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 SNPHO15079 494 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 EIF3HO15372 352 aaKnown RBP eCLIP14.81□□□□□ -0.04
RPF1-202ENST00000370656 FZD6O60353 706 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 RASSF9O75901 435 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 KIAA0754O94854 1291 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 UBXN7O94888 489 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 VIPP01282 170 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 FURINP09958 794 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 ZNF28P17035 718 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 TPSB2P20231 275 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 FDFT1P37268 417 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 GFERP55789 205 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 IFI35P80217 286 aaPredicted RBP14.81□□□□□ -0.04
RPF1-202ENST00000370656 CDK16Q00536 496 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 DHX9Q08211 1270 aaKnown RBP14.81□□□□□ -0.04
RPF1-202ENST00000370656 SEMA5AQ13591 1074 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 TPSAB1Q15661 275 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 UAP1Q16222 522 aaPredicted RBP14.81□□□□□ -0.04
RPF1-202ENST00000370656 ANKRD20A2Q5SQ80 823 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 ANKRD20A1Q5TYW2 823 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 ANKRD20A3Q5VUR7 823 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 MARVELD3Q96A59 401 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 TGM7Q96PF1 710 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 EPB41L4BQ9H329 900 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 OSGEPL1Q9H4B0 414 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 ZNF768Q9H5H4 540 aaKnown RBP14.81□□□□□ -0.04
RPF1-202ENST00000370656 CUEDC1Q9NWM3 386 aaPredicted RBP14.81□□□□□ -0.04
RPF1-202ENST00000370656 LRBAP50851 2863 aa14.81□□□□□ -0.04
RPF1-202ENST00000370656 C21orf140B9A014 251 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 MATN3O15232 486 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 GRID2O43424 1007 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 STK10O94804 968 aaKnown RBP14.8□□□□□ -0.04
RPF1-202ENST00000370656 CLDN7O95471 211 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 XRCC1P18887 633 aaPredicted RBP14.8□□□□□ -0.04
RPF1-202ENST00000370656 PTPN3P26045 913 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 HSD17B3P37058 310 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 VPS41P49754 854 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 SEPHS1P49903 392 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 CLCNKAP51800 687 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 PGDP52209 483 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 AP1B1Q10567 949 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 DNASE1L3Q13609 305 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 PARP6Q2NL67 630 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 TEX44Q53QW1 395 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 LRIG3Q6UXM1 1119 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 TMEM26Q6ZUK4 368 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 B4GALNT4Q76KP1 1039 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 TRMT10CQ7L0Y3 403 aaKnown RBP14.8□□□□□ -0.04
RPF1-202ENST00000370656 PPP1R3BQ86XI6 285 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 ZNF567Q8N184 647 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 TEX26Q8N6G2 289 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 CCDC110Q8TBZ0 833 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 ELMO2Q96JJ3 720 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 TEKT5Q96M29 485 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 FAM83DQ9H4H8 585 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 EIF2B3Q9NR50 452 aaKnown RBP14.8□□□□□ -0.04
RPF1-202ENST00000370656 PKD2L2Q9NZM6 624 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 PCYT1BQ9Y5K3 369 aaPredicted RBP14.8□□□□□ -0.04
RPF1-202ENST00000370656 NFS1Q9Y697 457 aa14.8□□□□□ -0.04
RPF1-202ENST00000370656 TEP1Q99973 2627 aaKnown RBP14.79□□□□□ -0.04
RPF1-202ENST00000370656 C1orf232A0A0U1RR37 186 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 RGSL1A5PLK6 1076 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 GPR89AB7ZAQ6 455 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 NUAK1O60285 661 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 METTL18O95568 372 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 GPR89BP0CG08 455 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 FGF5P12034 268 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 TYRP1P17643 537 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 TNNT3P45378 269 aaPredicted RBP14.79□□□□□ -0.04
RPF1-202ENST00000370656 RPL26P61254 145 aaKnown RBP14.79□□□□□ -0.04
RPF1-202ENST00000370656 UBE2IP63279 158 aaKnown RBP14.79□□□□□ -0.04
RPF1-202ENST00000370656 SH3BP2P78314 561 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.79□□□□□ -0.04
RPF1-202ENST00000370656 ANKRD22Q5VYY1 191 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 TIGD7Q6NT04 549 aaPredicted RBP14.79□□□□□ -0.04
RPF1-202ENST00000370656 CCNYQ8ND76 341 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 THAP4Q8WY91 577 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 ZDHHC12Q96GR4 267 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 PLEKHG4BQ96PX9 1271 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 SMIM14Q96QK8 99 aa14.79□□□□□ -0.04
RPF1-202ENST00000370656 ETNK1Q9HBU6 452 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms