RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 ATAD1Q8NBU5 361 aa16.9■□□□□ 0.3
PTP4A1-201ENST00000370651 ART5Q96L15 291 aa16.9■□□□□ 0.3
PTP4A1-201ENST00000370651 GPR22Q99680 433 aa16.9■□□□□ 0.3
PTP4A1-201ENST00000370651 C1QTNF7Q9BXJ2 289 aa16.9■□□□□ 0.3
PTP4A1-201ENST00000370651 EBPLQ9BY08 206 aa16.9■□□□□ 0.3
PTP4A1-201ENST00000370651 CLPXO76031 633 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 MAP1SQ66K74 1059 aaPredicted RBP16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 THOC7Q6I9Y2 204 aaKnown RBP16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 GPR142Q7Z601 462 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 TMEM110Q86TL2 294 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 OR7D4Q8NG98 312 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 TWNKQ96RR1 684 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 PIGUQ9H490 435 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 ANKRA2Q9H9E1 313 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 C11orf16Q9NQ32 467 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 ZNF780BQ9Y6R6 833 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 ALDH3A2P51648 485 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 MVKQ03426 396 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 IKBKEQ14164 716 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 OR9I1Q8NGQ6 314 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 FEM1CQ96JP0 617 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 TMEM106CQ9BVX2 250 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 MAF1Q9H063 256 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 MAGEH1Q9H213 219 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 EVLQ9UI08 416 aaPredicted RBP16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 HTRA2O43464 458 aaPredicted RBP16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 SCNN1AP37088 669 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 C9orf64Q5T6V5 341 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 DEFB132Q7Z7B7 95 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 SERPINA9Q86WD7 417 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 COLGALT2Q8IYK4 626 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 DDX1Q92499 740 aaKnown RBP16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 SLC38A4Q969I6 547 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 KLRG1Q96E93 195 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 PIWIL1Q96J94 861 aaKnown RBP16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 ACBD6Q9BR61 282 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 TBCCD1Q9NVR7 557 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 THG1LQ9NWX6 298 aaKnown RBP16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 NDUFB5O43674 189 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 MSCO60682 206 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 AHSGP02765 367 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 SLC35G4P0C7Q5 338 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 PHC1P78364 1004 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 DUSP4Q13115 394 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 FAM98AQ8NCA5 519 aaKnown RBP16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 ITFG2Q969R8 447 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 CCDC106Q9BWC9 280 aa16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 TTYH1Q9H313 450 aaPredicted RBP16.89■□□□□ 0.29
PTP4A1-201ENST00000370651 DLG5Q8TDM6 1919 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 GADD45GO95257 159 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 MMP3P08254 477 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 PABPC4LP0CB38 370 aaKnown RBP16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 ANXA8P13928 327 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 NIPAL1Q6NVV3 410 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 ADGRG6Q86SQ4 1221 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 CCDC36Q8IYA8 594 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 MANSC4A6NHS7 340 aaPredicted RBP16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 XYLBO75191 536 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 RFPL1O75677 317 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 MAPK9P45984 424 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 SLC51AQ86UW1 340 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 CLIP4Q8N3C7 705 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 DRAXINQ8NBI3 349 aaPredicted RBP16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 ZIM2Q9NZV7 527 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 OR10H1Q9Y4A9 318 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 CAMTA1Q9Y6Y1 1673 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 H3BM21 787 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 SLC9A3R1O14745 358 aaPredicted RBP16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 ERN1O75460 977 aaKnown RBP16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 ELFN1P0C7U0 828 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 FGF3P11487 239 aaPredicted RBP16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 CLCNKBP51801 687 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 DPY19L1Q2PZI1 675 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 USP41Q3LFD5 358 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 CRTC2Q53ET0 693 aaPredicted RBP16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 SYPL2Q5VXT5 272 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 PDE12Q6L8Q7 609 aaKnown RBP16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 PAQR3Q6TCH7 311 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 C17orf50Q8WW18 174 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 ZNF347Q96SE7 839 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 KIAA1522Q9P206 1035 aaPredicted RBP16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 KLRG2A4D1S0 409 aaPredicted RBP16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 TCAF2A6NFQ2 919 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 RORCP51449 518 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 LINGO4Q6UY18 593 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 EGFL6Q8IUX8 553 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 LPIN3Q9BQK8 851 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 POLR2J2Q9GZM3 115 aaKnown RBP16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 TAS2R7Q9NYW3 318 aa16.88■□□□□ 0.29
PTP4A1-201ENST00000370651 ZNF541Q9H0D2 1346 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 A0A1W2PRG6 482 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 OR51F1A6NGY5 319 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 ZW10O43264 779 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 EFNA1P20827 205 aaPredicted RBP16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 TAF13Q15543 124 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 CENPSQ8N2Z9 138 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 ZNF420Q8TAQ5 688 aaPredicted RBP16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 ADAMTS15Q8TE58 950 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 AP2M1Q96CW1 435 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms