RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 TMED5Q9Y3A6 229 aa15.7■□□□□ 0.1
COL17A1-202ENST00000369733 SMIM35A0A1B0GVV1 85 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 ACOX3O15254 700 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 HLA-DQA2P01906 255 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 OMPP47874 163 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 IFI44LQ53G44 452 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 MAP1SQ66K74 1059 aaPredicted RBP15.69■□□□□ 0.1
COL17A1-202ENST00000369733 SLC2A7Q6PXP3 512 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 CHSY3Q70JA7 882 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 PEBP4Q96S96 227 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 ZIM2Q9NZV7 527 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 FAM172BPA6NC97 362 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 RNASEH2AO75792 299 aaKnown RBP15.69■□□□□ 0.1
COL17A1-202ENST00000369733 RPL4P36578 427 aaKnown RBP15.69■□□□□ 0.1
COL17A1-202ENST00000369733 LAPTM5Q13571 262 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 OGFRL1Q5TC84 451 aaPredicted RBP15.69■□□□□ 0.1
COL17A1-202ENST00000369733 SYPL2Q5VXT5 272 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 TMEM110Q86TL2 294 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 METTL3Q86U44 580 aaKnown RBP15.69■□□□□ 0.1
COL17A1-202ENST00000369733 ZUFSPQ96AP4 578 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 ATG10Q9H0Y0 220 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 RHBGQ9H310 441 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 TRIT1Q9H3H1 467 aaKnown RBP15.69■□□□□ 0.1
COL17A1-202ENST00000369733 FKBPLQ9UIM3 349 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 H3BNH8 94 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 PSKH1P11801 424 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 CYP3A5P20815 502 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 DNAJB1P25685 340 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 GTF2E2P29084 291 aaKnown RBP15.69■□□□□ 0.1
COL17A1-202ENST00000369733 CCR4P51679 360 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 LILRA4P59901 499 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 SREBF2Q12772 1141 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 PPP1R8Q12972 351 aaKnown RBP15.69■□□□□ 0.1
COL17A1-202ENST00000369733 TMPRSS11BQ86T26 416 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 GSDMCQ9BYG8 508 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 GPN1Q9HCN4 374 aaPredicted RBP15.69■□□□□ 0.1
COL17A1-202ENST00000369733 C10orf71Q711Q0 1435 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 IQCF5A8MTL0 148 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 PRAMEF1O95521 474 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 DNAJA1P31689 397 aaKnown RBP15.69■□□□□ 0.1
COL17A1-202ENST00000369733 EPHX2P34913 555 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 C2orf80Q0P641 193 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 POM121L1PQ3SYA9 428 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 NOMO2Q5JPE7 1267 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 NFKBIZQ9BYH8 718 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.69■□□□□ 0.1
COL17A1-202ENST00000369733 ANKRA2Q9H9E1 313 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 MALT1Q9UDY8 824 aa15.69■□□□□ 0.1
COL17A1-202ENST00000369733 GSAPA4D1B5 854 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 NOTOA8MTQ0 251 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 STK25O00506 426 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 MSCO60682 206 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 ESR1P03372 595 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 OR4Q2P0C623 313 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 IVDP26440 423 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 TMBIM6P55061 237 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 SMARCB1Q12824 385 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 TAF10Q12962 218 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 TEAD4Q15561 434 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 ZNF730Q6ZMV8 503 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 OR8H3Q8N146 312 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 NTAN1Q96AB6 310 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 TMEM74Q96NL1 305 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 BIRC8Q96P09 236 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 RPF2Q9H7B2 306 aaKnown RBP15.68■□□□□ 0.1
COL17A1-202ENST00000369733 PHF11Q9UIL8 331 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 CCRL2O00421 344 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 CHRM5P08912 532 aaPredicted RBP15.68■□□□□ 0.1
COL17A1-202ENST00000369733 ITIH1P19827 911 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 EFNA1P20827 205 aaPredicted RBP15.68■□□□□ 0.1
COL17A1-202ENST00000369733 TACR2P21452 398 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 CD52P31358 61 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 RABL3Q5HYI8 236 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 RAET1GQ6H3X3 334 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 CXCL17Q6UXB2 119 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 AURKBQ96GD4 344 aaPredicted RBP15.68■□□□□ 0.1
COL17A1-202ENST00000369733 TCAF2A6NFQ2 919 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 HDCP19113 662 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 CRTC2Q53ET0 693 aaPredicted RBP15.68■□□□□ 0.1
COL17A1-202ENST00000369733 CAPN13Q6MZZ7 669 aaPredicted RBP15.68■□□□□ 0.1
COL17A1-202ENST00000369733 PAQR3Q6TCH7 311 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 RPS27LQ71UM5 84 aaKnown RBP15.68■□□□□ 0.1
COL17A1-202ENST00000369733 ZNF655Q8N720 491 aaPredicted RBP15.68■□□□□ 0.1
COL17A1-202ENST00000369733 ART5Q96L15 291 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 SLC2A6Q9UGQ3 507 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 PCDHGC4Q9Y5F7 938 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 IRAK3Q9Y616 596 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 SH3PXD2BA1X283 911 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 DDNO94850 711 aaPredicted RBP15.68■□□□□ 0.1
COL17A1-202ENST00000369733 GADD45GO95257 159 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 PGK1P00558 417 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 FGBP02675 491 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 HLA-DQB2P05538 268 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 IFI30P13284 250 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 ZNF10P21506 573 aaPredicted RBP15.68■□□□□ 0.1
COL17A1-202ENST00000369733 GPR1P46091 355 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 UFM1P61960 85 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 TUBA1BP68363 451 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 SGCGQ13326 291 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 RFTN1Q14699 578 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms