RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 A0A1W2PR77 199 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 C16orf96A6NNT2 1141 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 C10orf142B7Z368 130 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 C1QTNF3-AMACRE9PGA6 284 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 PCDHGA12O60330 932 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 EDF1O60869 148 aaKnown RBP8.66□□□□□ -1.02
SNX27-201ENST00000368838 SPAG7O75391 227 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 NDUFS3O75489 264 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 AP2A2O94973 939 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 LDOC1O95751 146 aaPredicted RBP8.66□□□□□ -1.02
SNX27-201ENST00000368838 CTSLP07711 333 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 ZNF37AP17032 561 aaPredicted RBP8.66□□□□□ -1.02
SNX27-201ENST00000368838 BPIP17213 487 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 C5AR1P21730 350 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 LHCGRP22888 699 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 VAMP1P23763 118 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 DRD3P35462 400 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 MMP12P39900 470 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 NSG1P42857 185 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 SLC12A2P55011 1212 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 DNAJB13P59910 316 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 MPP1Q00013 466 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 NFKB2Q00653 900 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 ASPHQ12797 758 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 CNTN1Q12860 1018 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 SFSWAPQ12872 951 aaKnown RBP8.66□□□□□ -1.02
SNX27-201ENST00000368838 RALGDSQ12967 914 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 FAM83EQ2M2I3 478 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 LRRC66Q68CR7 880 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 ERAP2Q6P179 960 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 ZNF549Q6P9A3 640 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 NXPE1Q8N323 547 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 RYBPQ8N488 228 aaPredicted RBP8.66□□□□□ -1.02
SNX27-201ENST00000368838 NKAPQ8N5F7 415 aaKnown RBP8.66□□□□□ -1.02
SNX27-201ENST00000368838 BCAS4Q8TDM0 211 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 LRRC8CQ8TDW0 803 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 DYDC1Q8WWB3 177 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 ZNF75CPQ92670 426 aaPredicted RBP8.66□□□□□ -1.02
SNX27-201ENST00000368838 KCTD12Q96CX2 325 aaKnown RBP8.66□□□□□ -1.02
SNX27-201ENST00000368838 CNDP2Q96KP4 475 aaKnown RBP8.66□□□□□ -1.02
SNX27-201ENST00000368838 TSNARE1Q96NA8 513 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 ELF4Q99607 663 aaPredicted RBP8.66□□□□□ -1.02
SNX27-201ENST00000368838 ZSCAN5AQ9BUG6 496 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 DERL2Q9GZP9 239 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 SAP130Q9H0E3 1048 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 MRPL46Q9H2W6 279 aaKnown RBP8.66□□□□□ -1.02
SNX27-201ENST00000368838 TFB2MQ9H5Q4 396 aaKnown RBP8.66□□□□□ -1.02
SNX27-201ENST00000368838 FAM96AQ9H5X1 160 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 ZDHHC6Q9H6R6 413 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 MANSC1Q9H8J5 431 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 NMRAL1Q9HBL8 299 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 PCMTD2Q9NV79 361 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 TMEM216Q9P0N5 145 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 MARCH4Q9P2E8 410 aaPredicted RBP8.66□□□□□ -1.02
SNX27-201ENST00000368838 SLC17A7Q9P2U7 560 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 SLC17A6Q9P2U8 582 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 B4GALT6Q9UBX8 382 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 SLC39A10Q9ULF5 831 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 FZD4Q9ULV1 537 aa8.66□□□□□ -1.02
SNX27-201ENST00000368838 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.66□□□□□ -1.02
SNX27-201ENST00000368838 KLHL33A6NCF5 533 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 TMEM114B3SHH9 223 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 ERVH48-1M5A8F1 160 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 TLR4O00206 839 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 NDUFAB1O14561 156 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 TSPAN6O43657 245 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 KLK8O60259 260 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 SNX3O60493 162 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 CLDN7O95471 211 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 SERPINE1P05121 402 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 ALPIP09923 528 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 LTA4HP09960 611 aaKnown RBP8.65□□□□□ -1.02
SNX27-201ENST00000368838 CBSLP0DN79 551 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 ACRV1P26436 265 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 EPHA8P29322 1005 aaPredicted RBP8.65□□□□□ -1.02
SNX27-201ENST00000368838 CBSP35520 551 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 CCR5P51681 352 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 TIAL1Q01085 375 aaKnown RBP eCLIP8.65□□□□□ -1.02
SNX27-201ENST00000368838 SEMG2Q02383 582 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 ARHGEF7Q14155 803 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 SEMA3AQ14563 771 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 SOWAHCQ53LP3 525 aaPredicted RBP8.65□□□□□ -1.02
SNX27-201ENST00000368838 CDKL4Q5MAI5 379 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 HENMT1Q5T8I9 393 aaKnown RBP8.65□□□□□ -1.02
SNX27-201ENST00000368838 GKAP1Q5VSY0 366 aaPredicted RBP8.65□□□□□ -1.02
SNX27-201ENST00000368838 NEK5Q6P3R8 708 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 TTC23LQ6PF05 361 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 ZYG11AQ6WRX3 759 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 ERN2Q76MJ5 926 aaKnown RBP8.65□□□□□ -1.02
SNX27-201ENST00000368838 YTHDF3Q7Z739 585 aaKnown RBP8.65□□□□□ -1.02
SNX27-201ENST00000368838 TBC1D1Q86TI0 1168 aaPredicted RBP8.65□□□□□ -1.02
SNX27-201ENST00000368838 CEP97Q8IW35 865 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 PIANPQ8IYJ0 282 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 GALNT15Q8N3T1 639 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 ANKRD42Q8N9B4 389 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 DDHD1Q8NEL9 900 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 PIP4K2CQ8TBX8 421 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 SAP25Q8TEE9 199 aa8.65□□□□□ -1.02
SNX27-201ENST00000368838 SREK1Q8WXA9 508 aaKnown RBP8.65□□□□□ -1.02
SNX27-201ENST00000368838 COQ10AQ96MF6 247 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms