RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CFAP99D6REC4 459 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 NEDD8-MDP1E9PL57 170 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 K7EPI3 171 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 SLC28A1O00337 649 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 RGS14O43566 566 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 SYNCRIPO60506 623 aaKnown RBP13.77□□□□□ -0.21
USF1-202ENST00000368020 LYNP07948 512 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 ANXA5P08758 320 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 ERVPABLB-1P60509 514 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 ARHGEF7Q14155 803 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 ANKRD54Q6NXT1 300 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 LETMD1Q6P1Q0 360 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 GDPD4Q6W3E5 623 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 ST13P4Q8IZP2 240 aaPredicted RBP13.77□□□□□ -0.21
USF1-202ENST00000368020 FAM9CQ8IZT9 166 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 GPR26Q8NDV2 337 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 HCAR2Q8TDS4 363 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 UCMAQ8WVF2 138 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 LRIG1Q96JA1 1093 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 KLHL32Q96NJ5 620 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 UHRF1Q96T88 793 aaPredicted RBP13.77□□□□□ -0.21
USF1-202ENST00000368020 NTMT1Q9BV86 223 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 SLC29A3Q9BZD2 475 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 FAM192AQ9GZU8 254 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 COPS7BQ9H9Q2 264 aaPredicted RBP13.77□□□□□ -0.21
USF1-202ENST00000368020 C8orf4Q9NR00 106 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 ARMC1Q9NVT9 282 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 ACTR3BQ9P1U1 418 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 MAP10Q9P2G4 905 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 NFKBIL1Q9UBC1 381 aaPredicted RBP13.77□□□□□ -0.21
USF1-202ENST00000368020 TRPS1Q9UHF7 1281 aa13.77□□□□□ -0.21
USF1-202ENST00000368020 A0A1B0GTL3 188 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 SLC16A5O15375 505 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 GPR39O43194 453 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 CAPN1P07384 714 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 EBLN1P0CF75 366 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 ARSAP15289 507 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 EPB42P16452 691 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 GJA1P17302 382 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 POLR2EP19388 210 aaKnown RBP13.76□□□□□ -0.21
USF1-202ENST00000368020 PRDX3P30048 256 aaKnown RBP13.76□□□□□ -0.21
USF1-202ENST00000368020 GKP32189 559 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 SPINT3P49223 89 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 STK19P49842 368 aaPredicted RBP13.76□□□□□ -0.21
USF1-202ENST00000368020 HNMTP50135 292 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 TRAF3Q13114 568 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 NFYCQ13952 458 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 PRSS36Q5K4E3 855 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 C6orf10Q5SRN2 563 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 IL27RAQ6UWB1 636 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 LAYNQ6UX15 382 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 GPR149Q86SP6 731 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 RETREG3Q86VR2 466 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 ZSWIM9Q86XI8 627 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 TICAM1Q8IUC6 712 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 OR4F6Q8NGB9 312 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 OR52B6Q8NGF0 335 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 RHBDF1Q96CC6 855 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 GAS2L1Q99501 681 aaPredicted RBP13.76□□□□□ -0.21
USF1-202ENST00000368020 BRD9Q9H8M2 597 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 PIDD1Q9HB75 910 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 HCFC1R1Q9NWW0 138 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 A0A0U1RQS6 177 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 OR7A17O14581 309 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 AP1G1O43747 822 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 AP2A2O94973 939 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 ASLP04424 464 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 UGT2B4P06133 528 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 MPC1LP0DKB6 136 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 TYRP14679 529 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 UGT1A6P19224 532 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 UGT1A1P22309 533 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 UGT1A4P22310 534 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 UGT1A3P35503 534 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 UGT1A5P35504 534 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 MSX2P35548 267 aaPredicted RBP13.76□□□□□ -0.21
USF1-202ENST00000368020 CCR2P41597 374 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 CTSOP43234 321 aaPredicted RBP13.76□□□□□ -0.21
USF1-202ENST00000368020 MAPK9P45984 424 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 DIO3P55073 304 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 EEFSECP57772 596 aaKnown RBP13.76□□□□□ -0.21
USF1-202ENST00000368020 PTSQ03393 145 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 RALGDSQ12967 914 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 NR6A1Q15406 480 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 TEAD2Q15562 447 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 ZNF77Q15935 545 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 PLEKHS1Q5SXH7 462 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 LCN8Q6JVE9 175 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 SYCE2Q6PIF2 218 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 TMC5Q6UXY8 1006 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 DPY19L3Q6ZPD9 716 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 NEK10Q6ZWH5 1172 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 GRASPQ7Z6J2 395 aaPredicted RBP13.76□□□□□ -0.21
USF1-202ENST00000368020 KIAA0907Q7Z7F0 614 aaPredicted RBP13.76□□□□□ -0.21
USF1-202ENST00000368020 TSPAN33Q86UF1 283 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 ZFAND4Q86XD8 727 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 TMEM25Q86YD3 366 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 RAVER1Q8IY67 606 aaKnown RBP13.76□□□□□ -0.21
USF1-202ENST00000368020 MARVELD2Q8N4S9 558 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 DPP10Q8N608 796 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms