RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 CRELD1Q96HD1 420 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 C10orf90Q96M02 699 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 CITED4Q96RK1 184 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 RAD9AQ99638 391 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 MED18Q9BUE0 208 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 GPR63Q9BZJ6 419 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 COG4Q9H9E3 785 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 MAGEF1Q9HAY2 307 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 FOLH1BQ9HBA9 442 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 HMG20AQ9NP66 347 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 BIN3Q9NQY0 253 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 DCTN4Q9UJW0 460 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 RNF11Q9Y3C5 154 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 MRPS18CQ9Y3D5 142 aaKnown RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 GRIP1Q9Y3R0 1128 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 DNMT3AQ9Y6K1 912 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 CNTNAP1P78357 1384 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 MON2Q7Z3U7 1717 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 CACNA1AO00555 2505 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 NALCNQ8IZF0 1738 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 A8MUA0 341 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 HUS1O60921 280 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 SCAF4O95104 1147 aaKnown RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 GUSBP08236 651 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 ARSBP15848 533 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 CDC25AP30304 524 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 PREPP48147 710 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 SLC11A1P49279 550 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 ERVK-9P63128 1117 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 PPIL2Q13356 520 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 SLC39A6Q13433 755 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 HFEQ30201 348 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 CLLU1Q5K131 121 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 TCEAL6Q6IPX3 200 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 R3HCC1LQ7Z5L2 792 aaKnown RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 LNX2Q8N448 690 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 ARRDC1Q8N5I2 433 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 ZNF248Q8NDW4 579 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 BBS10Q8TAM1 723 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 LNX1Q8TBB1 728 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.87□□□□□ -1.633e-6■■■■■ 50.4
RC3H1-202ENST00000367694 EAF2Q96CJ1 260 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 LRIG1Q96JA1 1093 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 ZNF514Q96K75 400 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 ZNF285Q96NJ3 590 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 CLUHP3Q96NS8 147 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 INPP5KQ9BT40 448 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 MRPL13Q9BYD1 178 aaKnown RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 MTIF3Q9H2K0 278 aaKnown RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 PDZD7Q9H5P4 517 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 OPA3Q9H6K4 179 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 RRAGCQ9HB90 399 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 PLSCR3Q9NRY6 295 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 OLAHQ9NV23 265 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 HYOU1Q9Y4L1 999 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 KCNMB2Q9Y691 235 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 ZSWIM8A7E2V4 1837 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 PXDNLA1KZ92 1463 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 USP54Q70EL1 1684 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 LRRC37A3O60309 1634 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 MTCL1Q9Y4B5 1905 aaKnown RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 FAM47DPA6NHR8 397 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 CCDC154A6NI56 674 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 CENPXA8MT69 81 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 UBE2CO00762 179 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 UBXN7O94888 489 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 HLA-DPA1P20036 260 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 CYP2B6P20813 491 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 AHCYP23526 432 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 ERP29P30040 261 aaKnown RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 PTGER3P43115 390 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 KCNMA1Q12791 1236 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 THOC5Q13769 683 aaKnown RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 GPR19Q15760 415 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 TYSND1Q2T9J0 566 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 FGD3Q5JSP0 725 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 ATCAYQ86WG3 371 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 DNAJC10Q8IXB1 793 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 PPM1KQ8N3J5 372 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 NANPQ8TBE9 248 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 EXOSC8Q96B26 276 aaKnown RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 GPR137Q96N19 417 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 RILPQ96NA2 401 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 KCNA7Q96RP8 456 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 BBS2Q9BXC9 721 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 ROPN1BQ9BZX4 212 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 MIXL1Q9H2W2 232 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 ROPN1Q9HAT0 212 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 ANKHQ9HCJ1 492 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 AGO4Q9HCK5 861 aaKnown RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 CCDC59Q9P031 241 aaKnown RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 SPASTQ9UBP0 616 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 ITGA11Q9UKX5 1188 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 MRPS2Q9Y399 296 aaKnown RBP4.87□□□□□ -1.63
RC3H1-202ENST00000367694 CDY2AQ9Y6F7 541 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 METP08581 1390 aa4.87□□□□□ -1.63
RC3H1-202ENST00000367694 KDM3BQ7LBC6 1761 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms