RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 FAM136AQ96C01 138 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 ZNF514Q96K75 400 aaPredicted RBP14.33□□□□□ -0.12
SF3B5-201ENST00000367569 CCNL2Q96S94 520 aaPredicted RBP14.33□□□□□ -0.12
SF3B5-201ENST00000367569 SAMD15Q9P1V8 674 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 SOX13Q9UN79 622 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 MAD1L1Q9Y6D9 718 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 TENM4Q6N022 2769 aa14.33□□□□□ -0.12
SF3B5-201ENST00000367569 LILRA5A6NI73 299 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 OR5K4A6NMS3 321 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 CD3EAPO15446 510 aaKnown RBP14.32□□□□□ -0.12
SF3B5-201ENST00000367569 JMJD7P0C870 316 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 CCL4P13236 92 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 XRCC1P18887 633 aaPredicted RBP14.32□□□□□ -0.12
SF3B5-201ENST00000367569 NSG1P42857 185 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 PAFAH1B1P43034 410 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 GPR3P46089 330 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 LEPRP48357 1165 aaKnown RBP14.32□□□□□ -0.12
SF3B5-201ENST00000367569 CDK16Q00536 496 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 SRSF6Q13247 344 aaKnown RBP14.32□□□□□ -0.12
SF3B5-201ENST00000367569 LAMB3Q13751 1172 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 ITIH4Q14624 930 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 SYTL3Q4VX76 610 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 METRNLQ641Q3 311 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 NLRP9Q7RTR0 991 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 UNC5BQ8IZJ1 945 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 TGM7Q96PF1 710 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 C19orf43Q9BQ61 176 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 CCM2Q9BSQ5 444 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 HGH1Q9BTY7 390 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 KIFC1Q9BW19 673 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 SLC40A1Q9NP59 571 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 POT1Q9NUX5 634 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 PCYOX1Q9UHG3 505 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 ACSL6Q9UKU0 697 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 RIMKLBQ9ULI2 386 aa14.32□□□□□ -0.12
SF3B5-201ENST00000367569 UBXN7O94888 489 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 THRAP10827 490 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 EIF3BP55884 814 aaKnown RBP14.31□□□□□ -0.12
SF3B5-201ENST00000367569 ETF1P62495 437 aaKnown RBP14.31□□□□□ -0.12
SF3B5-201ENST00000367569 GPLD1P80108 840 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 SARNPP82979 210 aaKnown RBP14.31□□□□□ -0.12
SF3B5-201ENST00000367569 ZNF658BQ4V348 819 aaPredicted RBP14.31□□□□□ -0.12
SF3B5-201ENST00000367569 MSS51Q4VC12 460 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 IRGCQ6NXR0 463 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 PACS1Q6VY07 963 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 FAM129CQ86XR2 697 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 PHC3Q8NDX5 983 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 HEXDCQ8WVB3 486 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 SH3KBP1Q96B97 665 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 LINC00615Q96LM1 132 aaPredicted RBP14.31□□□□□ -0.12
SF3B5-201ENST00000367569 DPH5Q9H2P9 285 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 XAB2Q9HCS7 855 aaKnown RBP14.31□□□□□ -0.12
SF3B5-201ENST00000367569 KCND1Q9NSA2 647 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 SLC17A6Q9P2U8 582 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 CIDEBQ9UHD4 219 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 ANAPC5Q9UJX4 755 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 DNMT3AQ9Y6K1 912 aaPredicted RBP14.31□□□□□ -0.12
SF3B5-201ENST00000367569 BSNQ9UPA5 3926 aa14.31□□□□□ -0.12
SF3B5-201ENST00000367569 ASH1LQ9NR48 2969 aaKnown RBP14.31□□□□□ -0.12
SF3B5-201ENST00000367569 SDK2Q58EX2 2172 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 NVLO15381 856 aaKnown RBP14.3□□□□□ -0.12
SF3B5-201ENST00000367569 KIF1CO43896 1103 aaKnown RBP14.3□□□□□ -0.12
SF3B5-201ENST00000367569 PRAMEF10O60809 474 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 AMD1P17707 334 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 MAGEA3P43357 314 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 SEPHS1P49903 392 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 LIMK2P53671 638 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 EPHA4P54764 986 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 DHX9Q08211 1270 aaKnown RBP14.3□□□□□ -0.12
SF3B5-201ENST00000367569 DHX34Q14147 1143 aaKnown RBP14.3□□□□□ -0.12
SF3B5-201ENST00000367569 BBS9Q3SYG4 887 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 KIAA0930Q6ICG6 404 aaPredicted RBP14.3□□□□□ -0.12
SF3B5-201ENST00000367569 WASH2PQ6VEQ5 465 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 FAM92BQ6ZTR7 304 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 VRK3Q8IV63 474 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 MCUQ8NE86 351 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 OR4D9Q8NGE8 314 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 ZNF592Q92610 1267 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 SLCO2A1Q92959 643 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 USP7Q93009 1102 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.3□□□□□ -0.12
SF3B5-201ENST00000367569 OR52A5Q9H2C5 316 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 VPS37BQ9H9H4 285 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 MRM3Q9HC36 420 aaKnown RBP14.3□□□□□ -0.12
SF3B5-201ENST00000367569 WASH6PQ9NQA3 447 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 OCIAD1Q9NX40 245 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 FOXJ2Q9P0K8 574 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 PLAGL1Q9UM63 463 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 RUVBL2Q9Y230 463 aaKnown RBP14.3□□□□□ -0.12
SF3B5-201ENST00000367569 RPS6KL1Q9Y6S9 549 aa14.3□□□□□ -0.12
SF3B5-201ENST00000367569 KRT87PA6NCN2 255 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 ZW10O43264 779 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 NIPSNAP2O75323 286 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 NDUFS3O75489 264 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 AP2A2O94973 939 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 FTH1P02794 183 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 OR56A5P0C7T3 313 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 LIPCP11150 499 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 IVDP26440 423 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 RPL21P46778 160 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms