RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 GTF2IRD2Q86UP8 949 aa12.27□□□□□ -0.45
TPR-201ENST00000367478 OR4M2Q8NGB6 313 aa12.27□□□□□ -0.45
TPR-201ENST00000367478 POF1BQ8WVV4 589 aa12.27□□□□□ -0.45
TPR-201ENST00000367478 RHPN2P1A8MT19 583 aa12.27□□□□□ -0.45
TPR-201ENST00000367478 ZNF14P17017 642 aaPredicted RBP12.27□□□□□ -0.45
TPR-201ENST00000367478 AZGP1P25311 298 aaKnown RBP12.27□□□□□ -0.45
TPR-201ENST00000367478 AQP1P29972 269 aa12.27□□□□□ -0.45
TPR-201ENST00000367478 MRPS23Q9Y3D9 190 aaKnown RBP12.27□□□□□ -0.45
TPR-201ENST00000367478 TBX1O43435 398 aa12.27□□□□□ -0.45
TPR-201ENST00000367478 SPATS1Q496A3 300 aa12.27□□□□□ -0.45
TPR-201ENST00000367478 AZIN2Q96A70 460 aa12.27□□□□□ -0.45
TPR-201ENST00000367478 ERVK-5Q9HDB9 667 aa12.27□□□□□ -0.45
TPR-201ENST00000367478 ACOX3O15254 700 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 SLC15A1P46059 708 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 MLLT6P55198 1093 aaPredicted RBP12.26□□□□□ -0.45
TPR-201ENST00000367478 SIM2Q14190 667 aaPredicted RBP12.26□□□□□ -0.45
TPR-201ENST00000367478 DEFB128Q7Z7B8 93 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 POC1BQ8TC44 478 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 SLC22A17Q8WUG5 538 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 IFT52Q9Y366 437 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 HSD11B1P28845 292 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 DNAJA1P31689 397 aaKnown RBP12.26□□□□□ -0.45
TPR-201ENST00000367478 CADM2Q8N3J6 435 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 OR14K1Q8NGZ2 314 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 S100A16Q96FQ6 103 aaKnown RBP12.26□□□□□ -0.45
TPR-201ENST00000367478 MYO19Q96H55 970 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 ZNF558Q96NG5 402 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 PRDM12Q9H4Q4 367 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 CLDN11O75508 207 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 ARL6IP5O75915 188 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 GADD45GO95257 159 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 CSTBP04080 98 aaKnown RBP12.26□□□□□ -0.45
TPR-201ENST00000367478 IL1R1P14778 569 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 HSD17B2P37059 387 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 CTBP1Q13363 440 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 ZNF627Q7L945 461 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 SSX6Q7RTT6 188 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 SLC9A9Q8IVB4 645 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 MCCC2Q9HCC0 563 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 MYNNQ9NPC7 610 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 TRIM36Q9NQ86 728 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 GDAP2Q9NXN4 497 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 PDLIM1O00151 329 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 NUMBP49757 651 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 ZDHHC21Q8IVQ6 265 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 COX18Q8N8Q8 333 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 SCGB1C1Q8TD33 95 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 MIPEPQ99797 713 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 BCORL1Q5H9F3 1711 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 UBAP2Q5T6F2 1119 aaKnown RBP12.26□□□□□ -0.45
TPR-201ENST00000367478 ARSKQ6UWY0 536 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 RBM15BQ8NDT2 890 aaKnown RBP12.26□□□□□ -0.45
TPR-201ENST00000367478 BLOC1S4Q9NUP1 217 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 IMP3Q9NV31 184 aaKnown RBP12.26□□□□□ -0.45
TPR-201ENST00000367478 A0A1B0GVM2 712 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 TCAF2A6NFQ2 919 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 EML1O00423 815 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 ANXA4P09525 319 aaPredicted RBP12.26□□□□□ -0.45
TPR-201ENST00000367478 PUM1Q14671 1186 aaKnown RBP eCLIP12.26□□□□□ -0.454e-8■■□□□ 13.7
TPR-201ENST00000367478 ZC3HC1Q86WB0 502 aaKnown RBP12.26□□□□□ -0.45
TPR-201ENST00000367478 NPEPPSL1A6NEC2 478 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 SLITRK3O94933 977 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 MC1RQ01726 317 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 MXD1Q05195 221 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 MON1AQ86VX9 555 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 PACRGLQ8N7B6 248 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 LSM14AQ8ND56 463 aaKnown RBP12.26□□□□□ -0.45
TPR-201ENST00000367478 KCNN1Q92952 543 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 PNPLA2Q96AD5 504 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 AGAP2Q99490 1192 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 LPIN3Q9BQK8 851 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 ZSCAN5AQ9BUG6 496 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 SERINC1Q9NRX5 453 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 PPM1BO75688 479 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 UGT2B10P36537 528 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 SLC9A3P48764 834 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 LPCAT4Q643R3 524 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 ZBTB2Q8N680 514 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 LRRC52Q8N7C0 313 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 OR5J2Q8NH18 312 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 TRIM43Q96BQ3 446 aaPredicted RBP12.26□□□□□ -0.45
TPR-201ENST00000367478 BTN2A3PQ96KV6 586 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 CCSER2Q9H7U1 834 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 C11orf16Q9NQ32 467 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 DERAQ9Y315 318 aa12.26□□□□□ -0.45
TPR-201ENST00000367478 LRRC10BA6NIK2 292 aa12.25□□□□□ -0.45
TPR-201ENST00000367478 GOT1P17174 413 aa12.25□□□□□ -0.45
TPR-201ENST00000367478 CLCN4P51793 760 aa12.25□□□□□ -0.45
TPR-201ENST00000367478 GTF2H2Q13888 395 aa12.25□□□□□ -0.45
TPR-201ENST00000367478 SEC23AQ15436 765 aa12.25□□□□□ -0.45
TPR-201ENST00000367478 REP15Q6BDI9 236 aa12.25□□□□□ -0.45
TPR-201ENST00000367478 GTF2H2CQ6P1K8 395 aa12.25□□□□□ -0.45
TPR-201ENST00000367478 OR6K6Q8NGW6 343 aa12.25□□□□□ -0.45
TPR-201ENST00000367478 NR4A3Q92570 626 aa12.25□□□□□ -0.45
TPR-201ENST00000367478 IFT27Q9BW83 186 aa12.25□□□□□ -0.45
TPR-201ENST00000367478 NUSAP1Q9BXS6 441 aaKnown RBP12.25□□□□□ -0.45
TPR-201ENST00000367478 BPIFA1Q9NP55 256 aa12.25□□□□□ -0.45
TPR-201ENST00000367478 MSRAQ9UJ68 235 aa12.25□□□□□ -0.45
TPR-201ENST00000367478 MYH13Q9UKX3 1938 aa12.25□□□□□ -0.45
TPR-201ENST00000367478 CPNE3O75131 537 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms