RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 ZNF605Q86T29 641 aa10.89□□□□□ -0.67
H3F3A-203ENST00000366815 CDKL3Q8IVW4 592 aaPredicted RBP10.89□□□□□ -0.67
H3F3A-203ENST00000366815 TRIM48Q8IWZ4 208 aa10.89□□□□□ -0.67
H3F3A-203ENST00000366815 KLHDC8BQ8IXV7 354 aa10.89□□□□□ -0.67
H3F3A-203ENST00000366815 CACNA2D3Q8IZS8 1091 aa10.89□□□□□ -0.67
H3F3A-203ENST00000366815 RSC1A1Q92681 617 aa10.89□□□□□ -0.67
H3F3A-203ENST00000366815 EXTL1Q92935 676 aa10.89□□□□□ -0.67
H3F3A-203ENST00000366815 C9orf72Q96LT7 481 aa10.89□□□□□ -0.67
H3F3A-203ENST00000366815 SPATA13Q96N96 652 aa10.89□□□□□ -0.67
H3F3A-203ENST00000366815 CTRCQ99895 268 aa10.89□□□□□ -0.67
H3F3A-203ENST00000366815 FAM118BQ9BPY3 351 aa10.89□□□□□ -0.67
H3F3A-203ENST00000366815 APOL2Q9BQE5 337 aa10.89□□□□□ -0.67
H3F3A-203ENST00000366815 SLC12A9Q9BXP2 914 aa10.89□□□□□ -0.67
H3F3A-203ENST00000366815 APMAPQ9HDC9 416 aa10.89□□□□□ -0.67
H3F3A-203ENST00000366815 KLHL3Q9UH77 587 aa10.89□□□□□ -0.67
H3F3A-203ENST00000366815 TMEM184BQ9Y519 407 aaPredicted RBP10.89□□□□□ -0.67
H3F3A-203ENST00000366815 TLN1Q9Y490 2541 aaKnown RBP10.88□□□□□ -0.67
H3F3A-203ENST00000366815 MACROD2A1Z1Q3 448 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 OR2AG2A6NM03 316 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 AGAP14A8MT82 685 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 STX7O15400 261 aaKnown RBP10.88□□□□□ -0.67
H3F3A-203ENST00000366815 TOX3O15405 576 aaPredicted RBP10.88□□□□□ -0.67
H3F3A-203ENST00000366815 POP7O75817 140 aaKnown RBP10.88□□□□□ -0.67
H3F3A-203ENST00000366815 PRAMEF1O95521 474 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 DLGAP3O95886 979 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 LIFP15018 202 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 VCLP18206 1134 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 LPOP22079 712 aaPredicted RBP10.88□□□□□ -0.67
H3F3A-203ENST00000366815 SOX18P35713 384 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 CAPZBP47756 277 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 LEPRP48357 1165 aaKnown RBP10.88□□□□□ -0.67
H3F3A-203ENST00000366815 NAP1L1P55209 391 aaKnown RBP10.88□□□□□ -0.67
H3F3A-203ENST00000366815 XIAPP98170 497 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 TBR1Q16650 682 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 DENND5AQ6IQ26 1287 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 FAM83HQ6ZRV2 1179 aaPredicted RBP10.88□□□□□ -0.67
H3F3A-203ENST00000366815 TIPARPQ7Z3E1 657 aaKnown RBP10.88□□□□□ -0.67
H3F3A-203ENST00000366815 AMZ2Q86W34 360 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 RBM12BQ8IXT5 1001 aaKnown RBP10.88□□□□□ -0.67
H3F3A-203ENST00000366815 IL22RA1Q8N6P7 574 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 OR4K2Q8NGD2 314 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 GPR150Q8NGU9 434 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 CCDC110Q8TBZ0 833 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 ZNF398Q8TD17 642 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 CXorf40BQ96DE9 158 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 TTC25Q96NG3 672 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 FERMT1Q9BQL6 677 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 ZPBPQ9BS86 351 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 ARNT2Q9HBZ2 717 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 DNAJB12Q9NXW2 375 aaKnown RBP10.88□□□□□ -0.67
H3F3A-203ENST00000366815 TRIM10Q9UDY6 481 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 EPHA6Q9UF33 1036 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 AAR2Q9Y312 384 aaKnown RBP10.88□□□□□ -0.67
H3F3A-203ENST00000366815 KCTD3Q9Y597 815 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 BOD1L1Q8NFC6 3051 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 TENM4Q6N022 2769 aa10.88□□□□□ -0.67
H3F3A-203ENST00000366815 A0A0U1RQJ8 604 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 C5orf60A6NFR6 353 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 B8ZZF3 427 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 POLR1CO15160 346 aaPredicted RBP10.87□□□□□ -0.67
H3F3A-203ENST00000366815 SGTAO43765 313 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 SRP72O76094 671 aaKnown RBP10.87□□□□□ -0.67
H3F3A-203ENST00000366815 STK17BO94768 372 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 TJP3O95049 919 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 AMD1P17707 334 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 HALP42357 657 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 ZNF140P52738 457 aaPredicted RBP10.87□□□□□ -0.67
H3F3A-203ENST00000366815 PLAURQ03405 335 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 KLF1Q13351 362 aaPredicted RBP10.87□□□□□ -0.67
H3F3A-203ENST00000366815 NFE2L1Q14494 772 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 RPE65Q16518 533 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 METRNLQ641Q3 311 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 KCTD11Q693B1 232 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 DARS2Q6PI48 645 aaKnown RBP10.87□□□□□ -0.67
H3F3A-203ENST00000366815 TMEM220Q6QAJ8 160 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 PRSS42Q7Z5A4 293 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 NLGN4XQ8N0W4 816 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 NLGN4YQ8NFZ3 816 aaPredicted RBP10.87□□□□□ -0.67
H3F3A-203ENST00000366815 ZNF514Q96K75 400 aaPredicted RBP10.87□□□□□ -0.67
H3F3A-203ENST00000366815 TGM7Q96PF1 710 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 BAG1Q99933 345 aaPredicted RBP10.87□□□□□ -0.67
H3F3A-203ENST00000366815 C19orf43Q9BQ61 176 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 RAB33BQ9H082 229 aa10.87□□□□□ -0.67
H3F3A-203ENST00000366815 ZNF768Q9H5H4 540 aaKnown RBP10.87□□□□□ -0.67
H3F3A-203ENST00000366815 LOC101059948A0A1B0GTJ6 334 aa10.86□□□□□ -0.67
H3F3A-203ENST00000366815 C2orf81A6NN90 581 aa10.86□□□□□ -0.67
H3F3A-203ENST00000366815 MIF4GDA9UHW6 222 aaKnown RBP10.86□□□□□ -0.67
H3F3A-203ENST00000366815 DDX3YO15523 660 aaKnown RBP10.86□□□□□ -0.67
H3F3A-203ENST00000366815 LDB2O43679 373 aa10.86□□□□□ -0.67
H3F3A-203ENST00000366815 KIF1CO43896 1103 aaKnown RBP10.86□□□□□ -0.67
H3F3A-203ENST00000366815 STK10O94804 968 aaKnown RBP10.86□□□□□ -0.67
H3F3A-203ENST00000366815 FAM87AP0C7U9 286 aa10.86□□□□□ -0.67
H3F3A-203ENST00000366815 ITGB6P18564 788 aa10.86□□□□□ -0.67
H3F3A-203ENST00000366815 MSH3P20585 1137 aa10.86□□□□□ -0.67
H3F3A-203ENST00000366815 MAP4P27816 1152 aaKnown RBP10.86□□□□□ -0.67
H3F3A-203ENST00000366815 CETN2P41208 172 aa10.86□□□□□ -0.67
H3F3A-203ENST00000366815 PPP1CAP62136 330 aa10.86□□□□□ -0.67
H3F3A-203ENST00000366815 SPARCL1Q14515 664 aa10.86□□□□□ -0.67
H3F3A-203ENST00000366815 PRPSAP1Q14558 356 aa10.86□□□□□ -0.67
H3F3A-203ENST00000366815 LONRF2Q1L5Z9 754 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms