RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 DYRK1BQ9Y463 629 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 PRSS51A0A1B0GVH4 220 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 FPGTO14772 594 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 OR10H3O60404 316 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 KERAO60938 352 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 SCELO95171 688 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 RFC2P35250 354 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 MAGEA6P43360 314 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 ILF2Q12905 390 aaKnown RBP13.69□□□□□ -0.22
COL6A1-201ENST00000361866 PARP15Q460N3 678 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 ATXN7L2Q5T6C5 722 aaPredicted RBP13.69□□□□□ -0.22
COL6A1-201ENST00000361866 PTCHD4Q6ZW05 846 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 HS3ST5Q8IZT8 346 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 WDR36Q8NI36 951 aaKnown RBP13.69□□□□□ -0.22
COL6A1-201ENST00000361866 C17orf50Q8WW18 174 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 PPP1R14BQ96C90 147 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 RNFT2Q96EX2 444 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 MTERF1Q99551 399 aaKnown RBP13.69□□□□□ -0.22
COL6A1-201ENST00000361866 OSBPL2Q9H1P3 480 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 DCSTAMPQ9H295 470 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 ZDHHC6Q9H6R6 413 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 ZFYVE1Q9HBF4 777 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 ZNF487B1APH4 448 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 ATE1O95260 518 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 BMP10O95393 424 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 OPN1SWP03999 348 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 FABP3P05413 133 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 MYL12AP19105 171 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 SLC6A2P23975 617 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 INHBCP55103 352 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 DNAJB13P59910 316 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 SRP54P61011 504 aaKnown RBP13.69□□□□□ -0.22
COL6A1-201ENST00000361866 NFATC3Q12968 1075 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 KRT73Q86Y46 540 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 OR4F6Q8NGB9 312 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 TMEM174Q8WUU8 243 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 MRPS31Q92665 395 aaKnown RBP13.69□□□□□ -0.22
COL6A1-201ENST00000361866 ZUFSPQ96AP4 578 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 C3orf30Q96M34 536 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 POLR3BQ9NW08 1133 aaPredicted RBP13.69□□□□□ -0.22
COL6A1-201ENST00000361866 ATP6V1HQ9UI12 483 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 PRKAB1Q9Y478 270 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 PCDHB3Q9Y5E6 796 aa13.69□□□□□ -0.22
COL6A1-201ENST00000361866 FFAR2O15552 330 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 TRBC1P01850 177 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 MAP2K4P45985 399 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 CDH12P55289 794 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 YBEYP58557 167 aaPredicted RBP13.68□□□□□ -0.22
COL6A1-201ENST00000361866 CYP4F8P98187 520 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 SKIV2LQ15477 1246 aaKnown RBP13.68□□□□□ -0.22
COL6A1-201ENST00000361866 ZFP69Q49AA0 526 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 CES4AQ5XG92 561 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 MSANTD2Q6P1R3 559 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 ZNF614Q8N883 585 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 RPRD1BQ9NQG5 326 aaKnown RBP13.68□□□□□ -0.22
COL6A1-201ENST00000361866 AP3M1Q9Y2T2 418 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 GMEB1Q9Y692 573 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 ZFP37Q9Y6Q3 630 aaPredicted RBP13.68□□□□□ -0.22
COL6A1-201ENST00000361866 BTBD19C9JJ37 291 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 H3BMQ9 156 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 INSIG1O15503 277 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 VARSP26640 1264 aaKnown RBP13.68□□□□□ -0.22
COL6A1-201ENST00000361866 ARRB2P32121 409 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 ST8SIA6P61647 398 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 RPS14P62263 151 aaKnown RBP13.68□□□□□ -0.22
COL6A1-201ENST00000361866 PYDC2Q56P42 97 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 LRRC73Q5JTD7 316 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 SERPINA9Q86WD7 417 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 COG8Q96MW5 612 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 AARSD1Q9BTE6 412 aaKnown RBP13.68□□□□□ -0.22
COL6A1-201ENST00000361866 MEAF6Q9HAF1 191 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 CMTM6Q9NX76 183 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 MAP10Q9P2G4 905 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 FCF1Q9Y324 198 aaKnown RBP13.68□□□□□ -0.22
COL6A1-201ENST00000361866 MANSC4A6NHS7 340 aaPredicted RBP13.68□□□□□ -0.22
COL6A1-201ENST00000361866 OR1I1O60431 355 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 SNX4O95219 450 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 CYP11A1P05108 521 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 SLC13A2Q13183 592 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 DEFB128Q7Z7B8 93 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 ISCA2Q86U28 154 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 OR52B6Q8NGF0 335 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 OR5K1Q8NHB7 308 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 NFKBIZQ9BYH8 718 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 PRRG3Q9BZD7 231 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 KLHL1Q9NR64 748 aa13.68□□□□□ -0.22
COL6A1-201ENST00000361866 SERPINA4P29622 427 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 HOXA11P31270 313 aaPredicted RBP13.67□□□□□ -0.22
COL6A1-201ENST00000361866 IL10RBQ08334 325 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 PABPC1LQ4VXU2 614 aaKnown RBP13.67□□□□□ -0.22
COL6A1-201ENST00000361866 C6orf141Q5SZD1 244 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 MYOCQ99972 504 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 C2orf49Q9BVC5 232 aaPredicted RBP13.67□□□□□ -0.22
COL6A1-201ENST00000361866 ANKRD60Q9BZ19 345 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 R3HDMLQ9H3Y0 253 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 CLN6Q9NWW5 311 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 H7C4K7 107 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 TNFRSF11BO00300 401 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 CLDN9O95484 217 aa13.67□□□□□ -0.22
COL6A1-201ENST00000361866 S100A1P23297 94 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms