RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 SLC17A6Q9P2U8 582 aa11.42□□□□□ -0.58
CNOT4-203ENST00000361528 KIF25Q9UIL4 384 aa11.42□□□□□ -0.58
CNOT4-203ENST00000361528 LOXHD1Q8IVV2 1947 aa11.42□□□□□ -0.58
CNOT4-203ENST00000361528 HNRNPCL2B2RXH8 293 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 SYN1P17600 705 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 EFNA1P20827 205 aaPredicted RBP11.41□□□□□ -0.58
CNOT4-203ENST00000361528 FSHRP23945 695 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 CCR10P46092 362 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 CDK8P49336 464 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 GLUD2P49448 558 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 ZNF143P52747 638 aaPredicted RBP11.41□□□□□ -0.58
CNOT4-203ENST00000361528 LIMK1P53667 647 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 KEAP1Q14145 624 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 ZNF124Q15973 351 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 GTDC1Q4AE62 458 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 PYCR3Q53H96 274 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 IER5Q5VY09 327 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 FSTL4Q6MZW2 842 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 CASC4Q6P4E1 433 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 TMPRSS9Q7Z410 1059 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 TTLL6Q8N841 843 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 FAM181AQ8N9Y4 354 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 SLC44A5Q8NCS7 719 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 CERS2Q96G23 380 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 ZC3HAV1LQ96H79 300 aaKnown RBP11.41□□□□□ -0.58
CNOT4-203ENST00000361528 WDFY2Q96P53 400 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 ACOX2Q99424 681 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 MNTQ99583 582 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 DPYSL5Q9BPU6 564 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 PPIL3Q9H2H8 161 aaKnown RBP11.41□□□□□ -0.58
CNOT4-203ENST00000361528 TASP1Q9H6P5 420 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 MED9Q9NWA0 146 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 LYARQ9NX58 379 aaKnown RBP11.41□□□□□ -0.58
CNOT4-203ENST00000361528 MAP3K20Q9NYL2 800 aaKnown RBP11.41□□□□□ -0.58
CNOT4-203ENST00000361528 PCOLCE2Q9UKZ9 415 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 ING4Q9UNL4 249 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 PCDHB5Q9Y5E4 795 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 TRAV20A0A0B4J274 112 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 A0A0J9YYE9 177 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 A0A0U1RQS6 177 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 WTIPA6NIX2 430 aaPredicted RBP11.41□□□□□ -0.58
CNOT4-203ENST00000361528 USP17L15C9J2P7 530 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 USP17L13C9JLJ4 530 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 USP17L11C9JVI0 530 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 USP17L18D6R9N7 530 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 USP17L22D6RA61 530 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 USP17L17D6RBQ6 530 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 USP17L19D6RCP7 530 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 USP17L20D6RJB6 530 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 MYL12BO14950 172 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 MICAL2O94851 1124 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 POLBP06746 335 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 MYL12AP19105 171 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 GADD45AP24522 165 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 TNFSF8P32971 234 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 MTHFRP42898 656 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 CSRP3P50461 194 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 CYP24A1Q07973 514 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 USP17L24Q0WX57 530 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 CUL2Q13617 745 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 MICAQ29983 383 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 TRIM60Q495X7 471 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 NPNTQ6UXI9 565 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 SLC46A3Q7Z3Q1 461 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 TXNRD3Q86VQ6 643 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 GHDCQ8N2G8 530 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 ARFGAP1Q8N6T3 406 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 ZNF540Q8NDQ6 660 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 DNERQ8NFT8 737 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 OR6M1Q8NGM8 313 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 CNIH3Q8TBE1 160 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 SORCS2Q96PQ0 1159 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 QKIQ96PU8 341 aaKnown RBP eCLIP11.41□□□□□ -0.587e-7■■■■■ 60.4
CNOT4-203ENST00000361528 SIGLEC11Q96RL6 698 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 SEPHS2Q99611 448 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 CGRRF1Q99675 332 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 NPAS1Q99742 590 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 DHX35Q9H5Z1 703 aaKnown RBP11.41□□□□□ -0.58
CNOT4-203ENST00000361528 RANBP3Q9H6Z4 567 aaPredicted RBP11.41□□□□□ -0.58
CNOT4-203ENST00000361528 EIF2B3Q9NR50 452 aaKnown RBP11.41□□□□□ -0.58
CNOT4-203ENST00000361528 KCNH7Q9NS40 1196 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 SETD4Q9NVD3 440 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 CDH9Q9ULB4 789 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 ZFR2Q9UPR6 939 aaKnown RBP11.41□□□□□ -0.58
CNOT4-203ENST00000361528 ZNF330Q9Y3S2 320 aaPredicted RBP11.41□□□□□ -0.58
CNOT4-203ENST00000361528 ASB4Q9Y574 426 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 IRS2Q9Y4H2 1338 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 NAV1Q8NEY1 1877 aa11.41□□□□□ -0.58
CNOT4-203ENST00000361528 A0A0A6YYJ9 748 aa11.4□□□□□ -0.58
CNOT4-203ENST00000361528 A0A1W2PQ09 198 aa11.4□□□□□ -0.58
CNOT4-203ENST00000361528 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
CNOT4-203ENST00000361528 LINC00587B1AMM8 73 aa11.4□□□□□ -0.58
CNOT4-203ENST00000361528 TARM1B6A8C7 271 aa11.4□□□□□ -0.58
CNOT4-203ENST00000361528 FAM86B1E9PN63 330 aa11.4□□□□□ -0.58
CNOT4-203ENST00000361528 HS6ST1O60243 411 aa11.4□□□□□ -0.58
CNOT4-203ENST00000361528 TSC22D2O75157 780 aa11.4□□□□□ -0.58
CNOT4-203ENST00000361528 VPS26AO75436 327 aa11.4□□□□□ -0.58
CNOT4-203ENST00000361528 APOL3O95236 402 aa11.4□□□□□ -0.58
CNOT4-203ENST00000361528 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
CNOT4-203ENST00000361528 DARSP14868 501 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms