RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 TAOK1Q7L7X3 1001 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 ZNF438Q7Z4V0 828 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 PDZD3Q86UT5 571 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 SLC35F3Q8IY50 421 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 GSPT2Q8IYD1 628 aaKnown RBP13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 KRT222Q8N1A0 295 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 ARL14Q8N4G2 192 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 MREGQ8N565 214 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 ZBTB2Q8N680 514 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 GPATCH11Q8N954 259 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 KYQ8NBH2 561 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 NAT14Q8WUY8 206 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 SLC44A1Q8WWI5 657 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 TSPAN17Q96FV3 270 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 GPR22Q99680 433 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 CAAP1Q9H8G2 361 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 TRMT6Q9UJA5 497 aaKnown RBP13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 CDYLQ9Y232 598 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 WDR37Q9Y2I8 494 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 PCDHGA1Q9Y5H4 931 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 COLEC10Q9Y6Z7 277 aa13.53□□□□□ -0.24
NSMCE1-201ENST00000361439 LY6G6EA0A0G2JKS1 128 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 EXOC1LA0A1B0GW35 172 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 FAM95CA0A1B0GW59 222 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 CTIFO43310 598 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 INHBAP08476 426 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 MTHFD1P11586 935 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 ACADLP28330 430 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 HOXD11P31277 338 aaPredicted RBP13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 MSH2P43246 934 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 UBE2IP63279 158 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 DAB2P98082 770 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 CLCA4Q14CN2 919 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 BRD3Q15059 726 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 TCEA2Q15560 299 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 TRIP6Q15654 476 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 RPE65Q16518 533 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 RSPO4Q2I0M5 234 aaPredicted RBP13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 LGSNQ5TDP6 509 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 WDR48Q8TAF3 677 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 LKAAEAR1Q8TD35 194 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 CD200R1Q8TD46 325 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 SLC37A2Q8TED4 501 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 UBLCP1Q8WVY7 318 aaPredicted RBP13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 GPR21Q99679 349 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 WWP1Q9H0M0 922 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 EPB41L4BQ9H329 900 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 MVB12BQ9H7P6 319 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 DLL3Q9NYJ7 618 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 SLC17A6Q9P2U8 582 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 CPNE7Q9UBL6 633 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 SLC24A2Q9UI40 661 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 U3KQA8 63 aa13.52□□□□□ -0.25
NSMCE1-201ENST00000361439 CCDC151A5D8V7 595 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 KDM1AO60341 852 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 TCEA3O75764 348 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 KRT38O76015 456 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 EML2O95834 649 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 VIPP01282 170 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 ITGA2BP08514 1039 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 NUDT17P0C025 328 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 ITGB6P18564 788 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 PDHA2P29803 388 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 RGS4P49798 205 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 CDKN2DP55273 166 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 TIAL1Q01085 375 aaKnown RBP eCLIP13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 HHEXQ03014 270 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 PDAP1Q13442 181 aaKnown RBP13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 BIRC2Q13490 618 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 RASA2Q15283 850 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 SEPT7Q16181 437 aaKnown RBP13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 CLPPQ16740 277 aaPredicted RBP13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 RBM20Q5T481 1227 aaKnown RBP13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 UNC5DQ6UXZ4 953 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 TRIM48Q8IWZ4 208 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 TBC1D21Q8IYX1 336 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 LILRA3Q8N6C8 439 aaPredicted RBP13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 ANKRD7Q92527 254 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 TFGQ92734 400 aaPredicted RBP13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 CXorf40BQ96DE9 158 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 PDLIM5Q96HC4 596 aaKnown RBP13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 ELMO2Q96JJ3 720 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 C12orf66Q96MD2 445 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 FOPNLQ96NB1 174 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 INSM2Q96T92 566 aaPredicted RBP13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 PAFAH2Q99487 392 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 NDNQ99608 321 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 DHRS4Q9BTZ2 278 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 EPB41L1Q9H4G0 881 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 SYTL2Q9HCH5 934 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 SLC40A1Q9NP59 571 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 SCHIP1Q9P0W5 487 aaPredicted RBP13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 SIRPGQ9P1W8 387 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 ZNF624Q9P2J8 865 aaPredicted RBP13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 POLG2Q9UHN1 485 aa13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 ARHGEF17Q96PE2 2063 aaPredicted RBP13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 ZFC3H1O60293 1989 aaKnown RBP13.51□□□□□ -0.25
NSMCE1-201ENST00000361439 GOLGA4Q13439 2230 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 507.5 ms