RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 BORCS6Q96GS4 357 aa13.27□□□□□ -0.29
LDB3-202ENST00000361373 CARS2Q9HA77 564 aaKnown RBP13.27□□□□□ -0.29
LDB3-202ENST00000361373 ZDHHC18Q9NUE0 388 aa13.27□□□□□ -0.29
LDB3-202ENST00000361373 CACNG4Q9UBN1 327 aa13.27□□□□□ -0.29
LDB3-202ENST00000361373 ZNF282Q9UDV7 671 aaPredicted RBP13.27□□□□□ -0.29
LDB3-202ENST00000361373 PHRF1Q9P1Y6 1649 aaKnown RBP13.27□□□□□ -0.29
LDB3-202ENST00000361373 FAM159BA6NKW6 160 aa13.27□□□□□ -0.29
LDB3-202ENST00000361373 G3V2T6 193 aa13.27□□□□□ -0.29
LDB3-202ENST00000361373 DLDP09622 509 aaKnown RBP13.27□□□□□ -0.29
LDB3-202ENST00000361373 ACVRL1P37023 503 aa13.27□□□□□ -0.29
LDB3-202ENST00000361373 TMED10P49755 219 aaKnown RBP13.27□□□□□ -0.29
LDB3-202ENST00000361373 OLR1P78380 273 aa13.27□□□□□ -0.29
LDB3-202ENST00000361373 ZDHHC24Q6UX98 284 aa13.27□□□□□ -0.29
LDB3-202ENST00000361373 TAS1R3Q7RTX0 852 aa13.27□□□□□ -0.29
LDB3-202ENST00000361373 C2orf73Q8N5S3 287 aaPredicted RBP13.27□□□□□ -0.29
LDB3-202ENST00000361373 GSDMCQ9BYG8 508 aa13.27□□□□□ -0.29
LDB3-202ENST00000361373 GRIP2Q9C0E4 1043 aa13.27□□□□□ -0.29
LDB3-202ENST00000361373 NEMP2A6NFY4 417 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 ADH1BP00325 375 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 CDK9P50750 372 aaKnown RBP13.26□□□□□ -0.29
LDB3-202ENST00000361373 PTGES3Q15185 160 aaKnown RBP13.26□□□□□ -0.29
LDB3-202ENST00000361373 TAB1Q15750 504 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 MINDY4Q4G0A6 757 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 PLEKHG4Q58EX7 1191 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 CLEC6AQ6EIG7 209 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 LYSMD3Q7Z3D4 306 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 HMGB4Q8WW32 186 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 SMPDL3AQ92484 453 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 SLC38A4Q969I6 547 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 COPS7AQ9UBW8 275 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 IQCF5A8MTL0 148 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 C9IYK1 514 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 GPR32O75388 356 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 TNFP01375 233 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 CYBAP13498 195 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 STAT5AP42229 794 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 RGS8P57771 180 aaPredicted RBP13.26□□□□□ -0.29
LDB3-202ENST00000361373 WDR60Q8WVS4 1066 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 NUP188Q5SRE5 1749 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 LIN7AO14910 233 aaPredicted RBP13.26□□□□□ -0.29
LDB3-202ENST00000361373 ADAMDEC1O15204 470 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 ATP1B2P14415 290 aaPredicted RBP13.26□□□□□ -0.29
LDB3-202ENST00000361373 CSNK2BP67870 215 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 PDK3Q15120 406 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 ZIK1Q3SY52 487 aaPredicted RBP13.26□□□□□ -0.29
LDB3-202ENST00000361373 RSBN1Q5VWQ0 802 aaPredicted RBP13.26□□□□□ -0.29
LDB3-202ENST00000361373 Q6ZVU0 165 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 UBR7Q8N806 425 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 DDX1Q92499 740 aaKnown RBP13.26□□□□□ -0.29
LDB3-202ENST00000361373 SLC29A3Q9BZD2 475 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 SFXN1Q9H9B4 322 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 WNT6Q9Y6F9 365 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 KDM3BQ7LBC6 1761 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 J3KR12 359 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 PIP5K1BO14986 540 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 AP2A2O94973 939 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 C1QTNF8P60827 252 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 RAB14P61106 215 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 ENPP7Q6UWV6 458 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 SLC9A6Q92581 669 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 RAB7BQ96AH8 199 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 ZBED3Q96IU2 234 aaPredicted RBP13.26□□□□□ -0.29
LDB3-202ENST00000361373 PRORSD1PA6NEY8 169 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 DUXAA6NLW8 204 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 MAGEB17A8MXT2 336 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 KPNA4O00629 521 aaPredicted RBP13.26□□□□□ -0.29
LDB3-202ENST00000361373 CFHP08603 1231 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 ERVK-8P63133 956 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 LIPEQ05469 1076 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 SLC9A5Q14940 896 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 PAQR3Q6TCH7 311 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 DNASE1L2Q92874 299 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 RBM4BQ9BQ04 359 aaKnown RBP13.26□□□□□ -0.29
LDB3-202ENST00000361373 RBM4Q9BWF3 364 aaKnown RBP13.26□□□□□ -0.29
LDB3-202ENST00000361373 FBXL12Q9NXK8 326 aa13.26□□□□□ -0.29
LDB3-202ENST00000361373 DNAJC25-GNG10A0A024R161 153 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 ECDO95905 644 aaPredicted RBP13.25□□□□□ -0.29
LDB3-202ENST00000361373 GJA1P17302 382 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 PRPS1L1P21108 318 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 CPN2P22792 545 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 PIK3CBP42338 1070 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 CHRNA6Q15825 494 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 AAK1Q2M2I8 961 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 CYP2U1Q7Z449 544 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 AMIGO2Q86SJ2 522 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 NUDT13Q86X67 352 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 LIX1Q8N485 282 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 ZNF781Q8N8C0 355 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 SMG8Q8ND04 991 aaKnown RBP13.25□□□□□ -0.29
LDB3-202ENST00000361373 ST13P5Q8NFI4 369 aaPredicted RBP13.25□□□□□ -0.29
LDB3-202ENST00000361373 OR7A2PQ8NGA2 310 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 SLC2A13Q96QE2 648 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 SLC2A11Q9BYW1 496 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 SLC32A1Q9H598 525 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 EQTNQ9NQ60 294 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 PTGFRNQ9P2B2 879 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 PACSIN3Q9UKS6 424 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 SCN11AQ9UI33 1791 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 TMEM150CB9EJG8 249 aa13.25□□□□□ -0.29
LDB3-202ENST00000361373 HOXB2P14652 356 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms