RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 HDAC3O15379 428 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 GPR89BP0CG08 455 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 CDKL1Q00532 357 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 PHKG1Q16816 387 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 RPS27LQ71UM5 84 aaKnown RBP20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 MAVSQ7Z434 540 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 FAM124AQ86V42 546 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 TRIM69Q86WT6 500 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 RASGRP3Q8IV61 690 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 ZNF483Q8TF39 744 aaPredicted RBP20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 HMGB4Q8WW32 186 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 STON2Q8WXE9 905 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 KLK6Q92876 244 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 MYLK2Q9H1R3 596 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 SGK2Q9HBY8 427 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 LTB4R2Q9NPC1 389 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 ITM2CQ9NQX7 267 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 PHPT1Q9NRX4 125 aaPredicted RBP20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 USP36Q9P275 1121 aaKnown RBP20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 HEY2Q9UBP5 337 aa20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 PTBP2Q9UKA9 531 aaKnown RBP20.56■□□□□ 0.88
MAP1LC3A-201ENST00000360668 KRBA1A5PL33 1030 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 LRRC14BA6NHZ5 514 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 GFYI3L273 518 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 LIN7AO14910 233 aaPredicted RBP20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 CHUKO15111 745 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 HNRNPCL1O60812 293 aaKnown RBP20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 MAPK9P45984 424 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 CCR3P51677 355 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 PLOD1Q02809 727 aaPredicted RBP20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 PCBP2Q15366 365 aaKnown RBP eCLIP20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 SH2D4BQ5SQS7 431 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 SULT1C3Q6IMI6 304 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 UBE2R2Q712K3 238 aaPredicted RBP20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 ZNF547Q8IVP9 402 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 AFAP1L2Q8N4X5 818 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 OR2T34Q8NGX1 318 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 AGR3Q8TD06 166 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 SKA2Q8WVK7 121 aaPredicted RBP20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 SKA1Q96BD8 255 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 TRIM54Q9BYV2 358 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 SHCBP1LQ9BZQ2 653 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 BTBD1Q9H0C5 482 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 PARVBQ9HBI1 364 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 TXLNGQ9NUQ3 528 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 PCTPQ9UKL6 214 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 FBXL21Q9UKT6 434 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 APOBEC2Q9Y235 224 aaKnown RBP20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 TMEM98Q9Y2Y6 226 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 NUMA1Q14980 2115 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 KANSL1LA0AUZ9 987 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 CFAP73A6NFT4 308 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 LRRC72A6NJI9 287 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 GRID2O43424 1007 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 MATN4O95460 622 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 IGLV3-19P01714 112 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 AGTR2P50052 363 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 IDH3AP50213 366 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 PPP2CBP62714 309 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 PPP2CAP67775 309 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 CLCQ05315 142 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 LCP2Q13094 533 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 SPRED3Q2MJR0 410 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 METTL2BQ6P1Q9 378 aaKnown RBP20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 EPGNQ6UW88 154 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 MTDHQ86UE4 582 aaKnown RBP20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 SLC22A15Q8IZD6 547 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 UBTD2Q8WUN7 234 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 NELL2Q99435 816 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 LGR4Q9BXB1 951 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 ZFP69BQ9UJL9 534 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 PDE10AQ9Y233 779 aa20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 DNMT3AQ9Y6K1 912 aaPredicted RBP20.55■□□□□ 0.88
MAP1LC3A-201ENST00000360668 ANKRD12Q6UB98 2062 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 UBFD1O14562 309 aaKnown RBP20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 CCDC22O60826 627 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 POP7O75817 140 aaKnown RBP20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 MLYCDO95822 493 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 MYCLP1P12525 358 aaPredicted RBP20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 CYP2A7P20853 494 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 PBLDP30039 288 aaPredicted RBP20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 IGFALSP35858 605 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 RPIAP49247 311 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 CDH13P55290 713 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 FZD5Q13467 585 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 UBXN2BQ14CS0 331 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 DENND6BQ8NEG7 585 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 FLCNQ8NFG4 579 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 OR2L2Q8NH16 312 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 HM13Q8TCT9 377 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 RHBDF1Q96CC6 855 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 ERP27Q96DN0 273 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 NSUN5Q96P11 429 aaKnown RBP20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 EGFL8Q99944 293 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 EBF4Q9BQW3 602 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 CD93Q9NPY3 652 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 GULP1Q9UBP9 304 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 EBF1Q9UH73 591 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 OR1A2Q9Y585 309 aa20.54■□□□□ 0.88
MAP1LC3A-201ENST00000360668 DOCK9Q9BZ29 2069 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms