RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 GLRBP48167 497 aa13.45□□□□□ -0.26
VPS29-201ENST00000360579 PTCHD3Q3KNS1 767 aa13.45□□□□□ -0.26
VPS29-201ENST00000360579 ZNF789Q5FWF6 425 aa13.45□□□□□ -0.26
VPS29-201ENST00000360579 CRB2Q5IJ48 1285 aa13.45□□□□□ -0.26
VPS29-201ENST00000360579 FNBP1LQ5T0N5 605 aa13.45□□□□□ -0.26
VPS29-201ENST00000360579 GPRC6AQ5T6X5 926 aa13.45□□□□□ -0.26
VPS29-201ENST00000360579 FBXO38Q6PIJ6 1188 aa13.45□□□□□ -0.26
VPS29-201ENST00000360579 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.45□□□□□ -0.26
VPS29-201ENST00000360579 COG1Q8WTW3 980 aa13.45□□□□□ -0.26
VPS29-201ENST00000360579 CEP41Q9BYV8 373 aa13.45□□□□□ -0.26
VPS29-201ENST00000360579 ZNF552Q9H707 407 aaPredicted RBP13.45□□□□□ -0.26
VPS29-201ENST00000360579 SMOXQ9NWM0 555 aa13.45□□□□□ -0.26
VPS29-201ENST00000360579 HACD3Q9P035 362 aa13.45□□□□□ -0.26
VPS29-201ENST00000360579 APCP25054 2843 aa13.45□□□□□ -0.26
VPS29-201ENST00000360579 A0A0A6YYK5 440 aaPredicted RBP13.44□□□□□ -0.26
VPS29-201ENST00000360579 HEATR9A2RTY3 570 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 GSAPA4D1B5 854 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 ZNF487B1APH4 448 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 LRRTM2O43300 516 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 PMPCBO75439 489 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 KLF7O75840 302 aaPredicted RBP13.44□□□□□ -0.26
VPS29-201ENST00000360579 KDELR1P24390 212 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 PBLDP30039 288 aaPredicted RBP13.44□□□□□ -0.26
VPS29-201ENST00000360579 AKT1P31749 480 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 FOLR3P41439 243 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 ARCN1P48444 511 aaKnown RBP13.44□□□□□ -0.26
VPS29-201ENST00000360579 SOX8P57073 446 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 HGSNATQ68CP4 663 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 DUS1LQ6P1R4 473 aaKnown RBP13.44□□□□□ -0.26
VPS29-201ENST00000360579 FAM151BQ6UXP7 276 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 SPNS2Q8IVW8 549 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 GPR135Q8IZ08 494 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 PLD5Q8N7P1 536 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 ACVR1CQ8NER5 493 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 OR4E2Q8NGC2 313 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 OR2L2Q8NH16 312 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 SPATA22Q8NHS9 363 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 PPM1MQ96MI6 270 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 CCM2Q9BSQ5 444 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 NAT10Q9H0A0 1025 aaKnown RBP13.44□□□□□ -0.26
VPS29-201ENST00000360579 SRMSQ9H3Y6 488 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 GLOD4Q9HC38 313 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 IL17CQ9P0M4 197 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 GPN3Q9UHW5 284 aaPredicted RBP13.44□□□□□ -0.26
VPS29-201ENST00000360579 PKP3Q9Y446 797 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 C2CD3Q4AC94 2353 aa13.44□□□□□ -0.26
VPS29-201ENST00000360579 POLQO75417 2590 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 ARHGAP10A1A4S6 786 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 DDX3YO15523 660 aaKnown RBP13.43□□□□□ -0.26
VPS29-201ENST00000360579 ZNF749O43361 778 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 LDB2O43679 373 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 UGT1A9O60656 530 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 EPOP01588 193 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 ZFXP17010 805 aaPredicted RBP13.43□□□□□ -0.26
VPS29-201ENST00000360579 UGT1A6P19224 532 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 UGT1A1P22309 533 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 UGT1A4P22310 534 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 PRDX3P30048 256 aaKnown RBP13.43□□□□□ -0.26
VPS29-201ENST00000360579 LLGL1Q15334 1064 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 ZRSR2Q15696 482 aaKnown RBP13.43□□□□□ -0.26
VPS29-201ENST00000360579 TEX44Q53QW1 395 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 FIGNQ5HY92 759 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 MLIPQ5VWP3 458 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 ZNF385CQ66K41 422 aaPredicted RBP13.43□□□□□ -0.26
VPS29-201ENST00000360579 B4GALNT4Q76KP1 1039 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 CUZD1Q86UP6 607 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 VSIG1Q86XK7 387 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 LCN9Q8WX39 176 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 SYN2Q92777 582 aaPredicted RBP13.43□□□□□ -0.26
VPS29-201ENST00000360579 INPP5DQ92835 1189 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 WDR77Q9BQA1 342 aaPredicted RBP13.43□□□□□ -0.26
VPS29-201ENST00000360579 MAK16Q9BXY0 300 aaKnown RBP13.43□□□□□ -0.26
VPS29-201ENST00000360579 PITPNM3Q9BZ71 974 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 UGT1A7Q9HAW7 530 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 UGT1A10Q9HAW8 530 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 UGT1A8Q9HAW9 530 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 ATP13A2Q9NQ11 1180 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 P4HTMQ9NXG6 502 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 UVRAGQ9P2Y5 699 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 FAM153AQ9UHL3 310 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 AP1M2Q9Y6Q5 423 aa13.43□□□□□ -0.26
VPS29-201ENST00000360579 LOC285095A0A1B0GVY8 99 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 APOL1O14791 398 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 SERPING1P05155 500 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 EDN3P14138 238 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 ST6GAL1P15907 406 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 ITGA3P26006 1051 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 CA5AP35218 305 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 LMAN1P49257 510 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 TAS2R40P59535 323 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 NFKBIBQ15653 356 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 CYP2A13Q16696 494 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 BCL7AQ4VC05 210 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 SLC9A4Q6AI14 798 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 ALKBH5Q6P6C2 394 aaKnown RBP13.42□□□□□ -0.26
VPS29-201ENST00000360579 SPOCD1Q6ZMY3 1216 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 GLT6D1Q7Z4J2 308 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 KCNMB4Q86W47 210 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 OR2Y1Q8NGV0 311 aa13.42□□□□□ -0.26
VPS29-201ENST00000360579 PROKR1Q8TCW9 393 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms