RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 HOXC11O43248 304 aaPredicted RBP17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 NUAK1O60285 661 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 EEDO75530 441 aaKnown RBP17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 CYP17A1P05093 508 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 CISD3P0C7P0 127 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 EBLN1P0CF75 366 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 TIMP2P16035 220 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 EPB42P16452 691 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 PEX2P28328 305 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 CCR7P32248 378 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 SP140Q13342 867 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 ZNF805Q5CZA5 627 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 LPCAT4Q643R3 524 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 SCIMPQ6UWF3 145 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 Q6ZSR9 355 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 DPPA4Q7L190 304 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 TRAM1L1Q8N609 369 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 OSCP1Q8WVF1 389 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 DUS3LQ96G46 650 aaKnown RBP17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 PPP3R2Q96LZ3 170 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 SAMD11Q96NU1 681 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 SLC52A3Q9NQ40 469 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 LEF1Q9UJU2 399 aaPredicted RBP17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 HCFC2Q9Y5Z7 792 aa17.96■□□□□ 0.46
PDLIM7-203ENST00000359895 PABPN1LA6NDY0 278 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 SLC28A1O00337 649 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 IFRD1O00458 451 aaPredicted RBP17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 KATNA1O75449 491 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 STK16O75716 305 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 NPPAP01160 153 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 SYN1P17600 705 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 POLR2JP52435 117 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 ST8SIA6P61647 398 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 MAD2L1Q13257 205 aaPredicted RBP17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 LRRC73Q5JTD7 316 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 IRAK1BP1Q5VVH5 260 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 NEK10Q6ZWH5 1172 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 SFRP1Q8N474 314 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 FAM156AQ8NDB6 213 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 SMG7Q92540 1137 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 ZSCAN5AQ9BUG6 496 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 SLC12A9Q9BXP2 914 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 SLC29A3Q9BZD2 475 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 TRIM15Q9C019 465 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 PCDH12Q9NPG4 1184 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 TMPRSS11EQ9UL52 423 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 SLC27A6Q9Y2P4 619 aa17.95■□□□□ 0.46
PDLIM7-203ENST00000359895 CCDC154A6NI56 674 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 VGLL3A8MV65 326 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 RGS14O43566 566 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 HSD17B1P14061 328 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 GGT5P36269 586 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 RPIAP49247 311 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 HTR6P50406 440 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 RHDQ02161 417 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 RALGDSQ12967 914 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 BNIP2Q12982 314 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 CBX2Q14781 532 aaPredicted RBP17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 NR6A1Q15406 480 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 UBE2R2Q712K3 238 aaPredicted RBP17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 HSD11B1LQ7Z5J1 315 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 GALNT13Q8IUC8 556 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 DCBLD1Q8N8Z6 715 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 ADCY4Q8NFM4 1077 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 ZUFSPQ96AP4 578 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 LRRC58Q96CX6 371 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 BTBD9Q96Q07 612 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 SLC32A1Q9H598 525 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 PARVBQ9HBI1 364 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 CD84Q9UIB8 345 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 RIMS3Q9UJD0 308 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 DTNAQ9Y4J8 743 aa17.94■□□□□ 0.46
PDLIM7-203ENST00000359895 MAGEA13PA6NCF6 341 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 LSM1O15116 133 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 ARHGEF15O94989 841 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 FTH1P02794 183 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 HIST1H2AGP0C0S8 130 aaPredicted RBP17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 HIST1H2ADP20671 130 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 ZFP36L2P47974 494 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 HNMTP50135 292 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 UFM1P61960 85 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 PRKG2Q13237 762 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 NFYCQ13952 458 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 ZNF284Q2VY69 593 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 GRAMD1BQ3KR37 738 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 SFT2D3Q587I9 215 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 ERAP2Q6P179 960 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 PRR23BQ6ZRT6 265 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 LRRC70Q7Z2Q7 622 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 DHFR2Q86XF0 187 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 RAVER1Q8IY67 606 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 ICA1LQ8NDH6 482 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 DDHD1Q8NEL9 900 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 ITFG1Q8TB96 612 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 SORCS1Q8WY21 1168 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 HIST1H2AHQ96KK5 128 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 HIST1H2AJQ99878 128 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 H2AFJQ9BTM1 129 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 EFHD1Q9BUP0 239 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 C1orf50Q9BV19 199 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms